Gene : Seita.7G246900 S. italica v2.2
Defline:  (1 of 4) PTHR24220:SF508 - ABC TRANSPORTER I FAMILY MEMBER 1 Genomic Order:  2469
Name:  ? Seita.7G246900 Secondary Identifier:  ? PAC:32703628
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G246900 0.5kb upstream 0.5kb upstream 1178 true scaffold_7: 30583424-30584601 Setaria italica
Seita.7G246900 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 30584102-30584601 Setaria italica
Seita.7G246900 0.5kb downstream 0.5kb downstream 1178 true scaffold_7: 30582924-30584101 Setaria italica
Seita.7G246900 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 30582924-30583423 Setaria italica
Seita.7G246900 1.0kb upstream 1.0kb upstream 1678 true scaffold_7: 30583424-30585101 Setaria italica
Seita.7G246900 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 30584102-30585101 Setaria italica
Seita.7G246900 1.0kb downstream 1.0kb downstream 1678 true scaffold_7: 30582424-30584101 Setaria italica
Seita.7G246900 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 30582424-30583423 Setaria italica
Seita.7G246900 2.0kb upstream 2.0kb upstream 2678 true scaffold_7: 30583424-30586101 Setaria italica
Seita.7G246900 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 30584102-30586101 Setaria italica
Seita.7G246900 2.0kb downstream 2.0kb downstream 2678 true scaffold_7: 30581424-30584101 Setaria italica
Seita.7G246900 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 30581424-30583423 Setaria italica
Seita.7G246900 5.0kb upstream 5.0kb upstream 5678 true scaffold_7: 30583424-30589101 Setaria italica
Seita.7G246900 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 30584102-30589101 Setaria italica
Seita.7G246900 5.0kb downstream 5.0kb downstream 5678 true scaffold_7: 30578424-30584101 Setaria italica
Seita.7G246900 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 30578424-30583423 Setaria italica
Seita.7G246900 10.0kb upstream 10.0kb upstream 10678 true scaffold_7: 30583424-30594101 Setaria italica
Seita.7G246900 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 30584102-30594101 Setaria italica
Seita.7G246900 10.0kb downstream 10.0kb downstream 10678 true scaffold_7: 30573424-30584101 Setaria italica
Seita.7G246900 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 30573424-30583423 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040954 5273 Angiosperm View MSA
122176760 5267 Panicoideae View MSA
124569129 5269 Grass View MSA
121344405 5274 Embryophyte View MSA
123380037 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.113        
cufflinks 6.287       High
cufflinks 2.754       Low
cufflinks 3.506        
cufflinks 3.438        
cufflinks 7.857       High
cufflinks 5.703        
cufflinks 4.886        
cufflinks 4.874        
cufflinks 6.694       High
cufflinks 3.418        
cufflinks 2.634       Low
cufflinks 5.915        
cufflinks 3.586        
cufflinks 5.056        
cufflinks 6.717       High
cufflinks 4.127        
cufflinks 3.206       Low
cufflinks 4.105        
cufflinks 6.38       High

0 Strain