Gene : Seita.7G249400 S. italica v2.2
Defline:  (1 of 9) 1.3.1.77 - Anthocyanidin reductase / ANR Genomic Order:  2494
Name:  ? Seita.7G249400 Secondary Identifier:  ? PAC:32702804
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sitalica PWY-6035 Setaria italica pathologic  
Sitalica PWY-641 Setaria italica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G249400 0.5kb upstream 0.5kb upstream 2026 true scaffold_7: 30699990-30702015 Setaria italica
Seita.7G249400 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 30699990-30700489 Setaria italica
Seita.7G249400 0.5kb downstream 0.5kb downstream 2026 true scaffold_7: 30700490-30702515 Setaria italica
Seita.7G249400 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 30702016-30702515 Setaria italica
Seita.7G249400 1.0kb upstream 1.0kb upstream 2526 true scaffold_7: 30699490-30702015 Setaria italica
Seita.7G249400 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 30699490-30700489 Setaria italica
Seita.7G249400 1.0kb downstream 1.0kb downstream 2526 true scaffold_7: 30700490-30703015 Setaria italica
Seita.7G249400 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 30702016-30703015 Setaria italica
Seita.7G249400 2.0kb upstream 2.0kb upstream 3526 true scaffold_7: 30698490-30702015 Setaria italica
Seita.7G249400 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 30698490-30700489 Setaria italica
Seita.7G249400 2.0kb downstream 2.0kb downstream 3526 true scaffold_7: 30700490-30704015 Setaria italica
Seita.7G249400 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 30702016-30704015 Setaria italica
Seita.7G249400 5.0kb upstream 5.0kb upstream 6526 true scaffold_7: 30695490-30702015 Setaria italica
Seita.7G249400 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 30695490-30700489 Setaria italica
Seita.7G249400 5.0kb downstream 5.0kb downstream 6526 true scaffold_7: 30700490-30707015 Setaria italica
Seita.7G249400 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 30702016-30707015 Setaria italica
Seita.7G249400 10.0kb upstream 10.0kb upstream 11526 true scaffold_7: 30690490-30702015 Setaria italica
Seita.7G249400 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 30690490-30700489 Setaria italica
Seita.7G249400 10.0kb downstream 10.0kb downstream 11526 true scaffold_7: 30700490-30712015 Setaria italica
Seita.7G249400 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 30702016-30712015 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122200181 5267 Panicoideae View MSA
124589961 5269 Grass View MSA
122043153 5273 Angiosperm View MSA
121310082 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain