Gene : Seita.7G255500 S. italica v2.2
Defline:  (1 of 1) PTHR12460:SF4 - ENTH/VHS FAMILY PROTEIN Genomic Order:  2555
Name:  ? Seita.7G255500 Secondary Identifier:  ? PAC:32704758
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G255500 0.5kb upstream 0.5kb upstream 3832 true scaffold_7: 31079764-31083595 Setaria italica
Seita.7G255500 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 31083096-31083595 Setaria italica
Seita.7G255500 0.5kb downstream 0.5kb downstream 3832 true scaffold_7: 31079264-31083095 Setaria italica
Seita.7G255500 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 31079264-31079763 Setaria italica
Seita.7G255500 1.0kb upstream 1.0kb upstream 4332 true scaffold_7: 31079764-31084095 Setaria italica
Seita.7G255500 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 31083096-31084095 Setaria italica
Seita.7G255500 1.0kb downstream 1.0kb downstream 4332 true scaffold_7: 31078764-31083095 Setaria italica
Seita.7G255500 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 31078764-31079763 Setaria italica
Seita.7G255500 2.0kb upstream 2.0kb upstream 5332 true scaffold_7: 31079764-31085095 Setaria italica
Seita.7G255500 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 31083096-31085095 Setaria italica
Seita.7G255500 2.0kb downstream 2.0kb downstream 5332 true scaffold_7: 31077764-31083095 Setaria italica
Seita.7G255500 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 31077764-31079763 Setaria italica
Seita.7G255500 5.0kb upstream 5.0kb upstream 8332 true scaffold_7: 31079764-31088095 Setaria italica
Seita.7G255500 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 31083096-31088095 Setaria italica
Seita.7G255500 5.0kb downstream 5.0kb downstream 8332 true scaffold_7: 31074764-31083095 Setaria italica
Seita.7G255500 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 31074764-31079763 Setaria italica
Seita.7G255500 10.0kb upstream 10.0kb upstream 13332 true scaffold_7: 31079764-31093095 Setaria italica
Seita.7G255500 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 31083096-31093095 Setaria italica
Seita.7G255500 10.0kb downstream 10.0kb downstream 13332 true scaffold_7: 31069764-31083095 Setaria italica
Seita.7G255500 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 31069764-31079763 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178389 5267 Panicoideae View MSA
124579847 5269 Grass View MSA
122049571 5273 Angiosperm View MSA
123428880 5275 Viridiplantae View MSA
121348039 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.774        
cufflinks 10.783       High
cufflinks 6.891        
cufflinks 4.59       Low
cufflinks 5.076       Low
cufflinks 10.512       High
cufflinks 7.273        
cufflinks 8.648        
cufflinks 6.132        
cufflinks 5.493       Low
cufflinks 8.169        
cufflinks 5.743        
cufflinks 5.993        
cufflinks 6.479        
cufflinks 9.117       High
cufflinks 7.515        
cufflinks 6.959        
cufflinks 9.055       High
cufflinks 5.49       Low
cufflinks 7.29        

0 Strain