Gene : Seita.7G190300 S. italica v2.2
Defline:  (1 of 29) PTHR11353 - CHAPERONIN Genomic Order:  1903
Name:  ? Seita.7G190300 Secondary Identifier:  ? PAC:32704039
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G190300 0.5kb upstream 0.5kb upstream 5753 true scaffold_7: 26595751-26601503 Setaria italica
Seita.7G190300 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 26595751-26596250 Setaria italica
Seita.7G190300 0.5kb downstream 0.5kb downstream 5753 true scaffold_7: 26596251-26602003 Setaria italica
Seita.7G190300 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 26601504-26602003 Setaria italica
Seita.7G190300 1.0kb upstream 1.0kb upstream 6253 true scaffold_7: 26595251-26601503 Setaria italica
Seita.7G190300 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 26595251-26596250 Setaria italica
Seita.7G190300 1.0kb downstream 1.0kb downstream 6253 true scaffold_7: 26596251-26602503 Setaria italica
Seita.7G190300 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 26601504-26602503 Setaria italica
Seita.7G190300 2.0kb upstream 2.0kb upstream 7253 true scaffold_7: 26594251-26601503 Setaria italica
Seita.7G190300 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 26594251-26596250 Setaria italica
Seita.7G190300 2.0kb downstream 2.0kb downstream 7253 true scaffold_7: 26596251-26603503 Setaria italica
Seita.7G190300 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 26601504-26603503 Setaria italica
Seita.7G190300 5.0kb upstream 5.0kb upstream 10253 true scaffold_7: 26591251-26601503 Setaria italica
Seita.7G190300 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 26591251-26596250 Setaria italica
Seita.7G190300 5.0kb downstream 5.0kb downstream 10253 true scaffold_7: 26596251-26606503 Setaria italica
Seita.7G190300 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 26601504-26606503 Setaria italica
Seita.7G190300 10.0kb upstream 10.0kb upstream 15253 true scaffold_7: 26586251-26601503 Setaria italica
Seita.7G190300 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 26586251-26596250 Setaria italica
Seita.7G190300 10.0kb downstream 10.0kb downstream 15253 true scaffold_7: 26596251-26611503 Setaria italica
Seita.7G190300 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 26601504-26611503 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194734 5267 Panicoideae View MSA
124575057 5269 Grass View MSA
122046551 5273 Angiosperm View MSA
121345633 5274 Embryophyte View MSA
123423902 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.058        
cufflinks 14.006     High  
cufflinks 9.05        
cufflinks 5.128       Low
cufflinks 4.896       Low
cufflinks 13.976     High  
cufflinks 11.103        
cufflinks 12.351        
cufflinks 10.205        
cufflinks 9.789        
cufflinks 13.779     High  
cufflinks 13.912     High  
cufflinks 8.757        
cufflinks 13.168        
cufflinks 14.797     High  
cufflinks 7.246       Low
cufflinks 15.842     High High
cufflinks 8.237        
cufflinks 7.762        
cufflinks 19.434     High High

0 Strain