Gene : Seita.7G189600 S. italica v2.2
Defline:  (1 of 3) PTHR19139:SF134 - AQUAPORIN TIP2-3-RELATED Genomic Order:  1896
Name:  ? Seita.7G189600 Secondary Identifier:  ? PAC:32704422
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G189600 0.5kb upstream 0.5kb upstream 1666 true scaffold_7: 26563113-26564778 Setaria italica
Seita.7G189600 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 26564279-26564778 Setaria italica
Seita.7G189600 0.5kb downstream 0.5kb downstream 1666 true scaffold_7: 26562613-26564278 Setaria italica
Seita.7G189600 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 26562613-26563112 Setaria italica
Seita.7G189600 1.0kb upstream 1.0kb upstream 2166 true scaffold_7: 26563113-26565278 Setaria italica
Seita.7G189600 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 26564279-26565278 Setaria italica
Seita.7G189600 1.0kb downstream 1.0kb downstream 2166 true scaffold_7: 26562113-26564278 Setaria italica
Seita.7G189600 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 26562113-26563112 Setaria italica
Seita.7G189600 2.0kb upstream 2.0kb upstream 3166 true scaffold_7: 26563113-26566278 Setaria italica
Seita.7G189600 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 26564279-26566278 Setaria italica
Seita.7G189600 2.0kb downstream 2.0kb downstream 3166 true scaffold_7: 26561113-26564278 Setaria italica
Seita.7G189600 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 26561113-26563112 Setaria italica
Seita.7G189600 5.0kb upstream 5.0kb upstream 6166 true scaffold_7: 26563113-26569278 Setaria italica
Seita.7G189600 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 26564279-26569278 Setaria italica
Seita.7G189600 5.0kb downstream 5.0kb downstream 6166 true scaffold_7: 26558113-26564278 Setaria italica
Seita.7G189600 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 26558113-26563112 Setaria italica
Seita.7G189600 10.0kb upstream 10.0kb upstream 11166 true scaffold_7: 26563113-26574278 Setaria italica
Seita.7G189600 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 26564279-26574278 Setaria italica
Seita.7G189600 10.0kb downstream 10.0kb downstream 11166 true scaffold_7: 26553113-26564278 Setaria italica
Seita.7G189600 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 26553113-26563112 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180815 5267 Panicoideae View MSA
124584121 5269 Grass View MSA
122045007 5273 Angiosperm View MSA
121351438 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.256     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.063     Low  
cufflinks 0.046     Low Low
cufflinks 0.214        
cufflinks 5.387        
cufflinks 0.014     Low Low
cufflinks 184.59     High High
cufflinks 70.702     High  
cufflinks 74.999     High  
cufflinks 393.282     High High
cufflinks 0.02     Low Low
cufflinks 144.631     High High
cufflinks 0.271        
cufflinks 108.568     High  
cufflinks 0.235        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 197.414     High High

0 Strain