Gene : Seita.7G200500 S. italica v2.2
Genomic Order:  2005 Name:  ? Seita.7G200500
Secondary Identifier:  ? PAC:32701832
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G200500 0.5kb upstream 0.5kb upstream 6024 true scaffold_7: 27278635-27284658 Setaria italica
Seita.7G200500 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 27284159-27284658 Setaria italica
Seita.7G200500 0.5kb downstream 0.5kb downstream 6024 true scaffold_7: 27278135-27284158 Setaria italica
Seita.7G200500 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 27278135-27278634 Setaria italica
Seita.7G200500 1.0kb upstream 1.0kb upstream 6524 true scaffold_7: 27278635-27285158 Setaria italica
Seita.7G200500 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 27284159-27285158 Setaria italica
Seita.7G200500 1.0kb downstream 1.0kb downstream 6524 true scaffold_7: 27277635-27284158 Setaria italica
Seita.7G200500 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 27277635-27278634 Setaria italica
Seita.7G200500 2.0kb upstream 2.0kb upstream 7524 true scaffold_7: 27278635-27286158 Setaria italica
Seita.7G200500 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 27284159-27286158 Setaria italica
Seita.7G200500 2.0kb downstream 2.0kb downstream 7524 true scaffold_7: 27276635-27284158 Setaria italica
Seita.7G200500 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 27276635-27278634 Setaria italica
Seita.7G200500 5.0kb upstream 5.0kb upstream 10524 true scaffold_7: 27278635-27289158 Setaria italica
Seita.7G200500 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 27284159-27289158 Setaria italica
Seita.7G200500 5.0kb downstream 5.0kb downstream 10524 true scaffold_7: 27273635-27284158 Setaria italica
Seita.7G200500 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 27273635-27278634 Setaria italica
Seita.7G200500 10.0kb upstream 10.0kb upstream 15524 true scaffold_7: 27278635-27294158 Setaria italica
Seita.7G200500 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 27284159-27294158 Setaria italica
Seita.7G200500 10.0kb downstream 10.0kb downstream 15524 true scaffold_7: 27268635-27284158 Setaria italica
Seita.7G200500 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 27268635-27278634 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185949 5267 Panicoideae View MSA
124568593 5269 Grass View MSA
122041645 5273 Angiosperm View MSA
121343821 5274 Embryophyte View MSA
123426521 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.649       High
cufflinks 1.065        
cufflinks 1.222        
cufflinks 1.141        
cufflinks 1.135        
cufflinks 1.105        
cufflinks 0.833       Low
cufflinks 1.482        
cufflinks 1.592       High
cufflinks 1.435        
cufflinks 1.036       Low
cufflinks 1.48        
cufflinks 1.47        
cufflinks 1.212        
cufflinks 1.177        
cufflinks 1.24        
cufflinks 1.574       High
cufflinks 1.568       High
cufflinks 1.065        
cufflinks 1.492        

0 Strain