Gene : Seita.7G203000 S. italica v2.2
Defline:  (1 of 2) KOG4559 - Uncharacterized conserved protein Genomic Order:  2030
Name:  ? Seita.7G203000 Secondary Identifier:  ? PAC:32702859
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G203000 0.5kb upstream 0.5kb upstream 15735 true scaffold_7: 27524106-27539840 Setaria italica
Seita.7G203000 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 27539341-27539840 Setaria italica
Seita.7G203000 0.5kb downstream 0.5kb downstream 15735 true scaffold_7: 27523606-27539340 Setaria italica
Seita.7G203000 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 27523606-27524105 Setaria italica
Seita.7G203000 1.0kb upstream 1.0kb upstream 16235 true scaffold_7: 27524106-27540340 Setaria italica
Seita.7G203000 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 27539341-27540340 Setaria italica
Seita.7G203000 1.0kb downstream 1.0kb downstream 16235 true scaffold_7: 27523106-27539340 Setaria italica
Seita.7G203000 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 27523106-27524105 Setaria italica
Seita.7G203000 2.0kb upstream 2.0kb upstream 17235 true scaffold_7: 27524106-27541340 Setaria italica
Seita.7G203000 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 27539341-27541340 Setaria italica
Seita.7G203000 2.0kb downstream 2.0kb downstream 17235 true scaffold_7: 27522106-27539340 Setaria italica
Seita.7G203000 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 27522106-27524105 Setaria italica
Seita.7G203000 5.0kb upstream 5.0kb upstream 20235 true scaffold_7: 27524106-27544340 Setaria italica
Seita.7G203000 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 27539341-27544340 Setaria italica
Seita.7G203000 5.0kb downstream 5.0kb downstream 20235 true scaffold_7: 27519106-27539340 Setaria italica
Seita.7G203000 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 27519106-27524105 Setaria italica
Seita.7G203000 10.0kb upstream 10.0kb upstream 25235 true scaffold_7: 27524106-27549340 Setaria italica
Seita.7G203000 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 27539341-27549340 Setaria italica
Seita.7G203000 10.0kb downstream 10.0kb downstream 25235 true scaffold_7: 27514106-27539340 Setaria italica
Seita.7G203000 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 27514106-27524105 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176107 5267 Panicoideae View MSA
124581370 5269 Grass View MSA
122045218 5273 Angiosperm View MSA
121344209 5274 Embryophyte View MSA
123427931 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.699       High
cufflinks 4.136        
cufflinks 9.637       High
cufflinks 7.369        
cufflinks 4.609        
cufflinks 4.052        
cufflinks 4.412        
cufflinks 3.672        
cufflinks 2.739       Low
cufflinks 4.251        
cufflinks 5.405        
cufflinks 3.929        
cufflinks 4.918        
cufflinks 9.307       High
cufflinks 4.844        
cufflinks 7.108        
cufflinks 4.343        
cufflinks 10.697       High
cufflinks 5.488        
cufflinks 3.659        

0 Strain