Gene : Seita.7G201900 S. italica v2.2
Defline:  (1 of 1) PTHR19302:SF37 - GAMMA-TUBULIN COMPLEX COMPONENT 6 Genomic Order:  2019
Name:  ? Seita.7G201900 Secondary Identifier:  ? PAC:32702820
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G201900 0.5kb upstream 0.5kb upstream 9536 true scaffold_7: 27393055-27402590 Setaria italica
Seita.7G201900 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 27402091-27402590 Setaria italica
Seita.7G201900 0.5kb downstream 0.5kb downstream 9536 true scaffold_7: 27392555-27402090 Setaria italica
Seita.7G201900 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 27392555-27393054 Setaria italica
Seita.7G201900 1.0kb upstream 1.0kb upstream 10036 true scaffold_7: 27393055-27403090 Setaria italica
Seita.7G201900 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 27402091-27403090 Setaria italica
Seita.7G201900 1.0kb downstream 1.0kb downstream 10036 true scaffold_7: 27392055-27402090 Setaria italica
Seita.7G201900 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 27392055-27393054 Setaria italica
Seita.7G201900 2.0kb upstream 2.0kb upstream 11036 true scaffold_7: 27393055-27404090 Setaria italica
Seita.7G201900 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 27402091-27404090 Setaria italica
Seita.7G201900 2.0kb downstream 2.0kb downstream 11036 true scaffold_7: 27391055-27402090 Setaria italica
Seita.7G201900 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 27391055-27393054 Setaria italica
Seita.7G201900 5.0kb upstream 5.0kb upstream 14036 true scaffold_7: 27393055-27407090 Setaria italica
Seita.7G201900 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 27402091-27407090 Setaria italica
Seita.7G201900 5.0kb downstream 5.0kb downstream 14036 true scaffold_7: 27388055-27402090 Setaria italica
Seita.7G201900 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 27388055-27393054 Setaria italica
Seita.7G201900 10.0kb upstream 10.0kb upstream 19036 true scaffold_7: 27393055-27412090 Setaria italica
Seita.7G201900 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 27402091-27412090 Setaria italica
Seita.7G201900 10.0kb downstream 10.0kb downstream 19036 true scaffold_7: 27383055-27402090 Setaria italica
Seita.7G201900 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 27383055-27393054 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041339 5273 Angiosperm View MSA
122178365 5267 Panicoideae View MSA
124581280 5269 Grass View MSA
121345944 5274 Embryophyte View MSA
123428052 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.003        
cufflinks 6.843       High
cufflinks 0.675       Low
cufflinks 0.495       Low
cufflinks 1.1        
cufflinks 5.908       High
cufflinks 3.411        
cufflinks 3.27        
cufflinks 3.174        
cufflinks 1.729        
cufflinks 4.793        
cufflinks 3.131        
cufflinks 2.88        
cufflinks 0.677       Low
cufflinks 5.547       High
cufflinks 2.41        
cufflinks 3.438        
cufflinks 1.6        
cufflinks 0.304       Low
cufflinks 4.585        

0 Strain