Gene : Seita.7G211400 S. italica v2.2
Defline:  (1 of 1) PTHR22814:SF49 - HEAVY METAL ASSOCIATED DOMAIN-CONTAINING PROTEIN Genomic Order:  2114
Name:  ? Seita.7G211400 Secondary Identifier:  ? PAC:32705361
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G211400 0.5kb upstream 0.5kb upstream 1633 true scaffold_7: 28201959-28203591 Setaria italica
Seita.7G211400 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 28203092-28203591 Setaria italica
Seita.7G211400 0.5kb downstream 0.5kb downstream 1633 true scaffold_7: 28201459-28203091 Setaria italica
Seita.7G211400 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 28201459-28201958 Setaria italica
Seita.7G211400 1.0kb upstream 1.0kb upstream 2133 true scaffold_7: 28201959-28204091 Setaria italica
Seita.7G211400 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 28203092-28204091 Setaria italica
Seita.7G211400 1.0kb downstream 1.0kb downstream 2133 true scaffold_7: 28200959-28203091 Setaria italica
Seita.7G211400 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 28200959-28201958 Setaria italica
Seita.7G211400 2.0kb upstream 2.0kb upstream 3133 true scaffold_7: 28201959-28205091 Setaria italica
Seita.7G211400 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 28203092-28205091 Setaria italica
Seita.7G211400 2.0kb downstream 2.0kb downstream 3133 true scaffold_7: 28199959-28203091 Setaria italica
Seita.7G211400 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 28199959-28201958 Setaria italica
Seita.7G211400 5.0kb upstream 5.0kb upstream 6133 true scaffold_7: 28201959-28208091 Setaria italica
Seita.7G211400 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 28203092-28208091 Setaria italica
Seita.7G211400 5.0kb downstream 5.0kb downstream 6133 true scaffold_7: 28196959-28203091 Setaria italica
Seita.7G211400 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 28196959-28201958 Setaria italica
Seita.7G211400 10.0kb upstream 10.0kb upstream 11133 true scaffold_7: 28201959-28213091 Setaria italica
Seita.7G211400 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 28203092-28213091 Setaria italica
Seita.7G211400 10.0kb downstream 10.0kb downstream 11133 true scaffold_7: 28191959-28203091 Setaria italica
Seita.7G211400 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 28191959-28201958 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026736 5273 Angiosperm View MSA
122175576 5267 Panicoideae View MSA
124577304 5269 Grass View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.586        
cufflinks 1.319        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low Low
cufflinks 0.051     Low Low
cufflinks 1.312        
cufflinks 0.41        
cufflinks 1.173        
cufflinks 0.17        
cufflinks 2.232        
cufflinks 0.802        
cufflinks 4.72       High
cufflinks 3.475       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.442        
cufflinks 0.087     Low  
cufflinks 5.303       High
cufflinks 0.033     Low Low
cufflinks 0.017     Low Low
cufflinks 3.395       High

0 Strain