Gene : Seita.7G213400 S. italica v2.2
Defline:  (1 of 1) PTHR14659:SF1 - ALPHA- AND GAMMA-ADAPTIN-BINDING PROTEIN P34 Genomic Order:  2134
Name:  ? Seita.7G213400 Secondary Identifier:  ? PAC:32702587
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G213400 0.5kb upstream 0.5kb upstream 3424 true scaffold_7: 28346866-28350289 Setaria italica
Seita.7G213400 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 28346866-28347365 Setaria italica
Seita.7G213400 0.5kb downstream 0.5kb downstream 3424 true scaffold_7: 28347366-28350789 Setaria italica
Seita.7G213400 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 28350290-28350789 Setaria italica
Seita.7G213400 1.0kb upstream 1.0kb upstream 3924 true scaffold_7: 28346366-28350289 Setaria italica
Seita.7G213400 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 28346366-28347365 Setaria italica
Seita.7G213400 1.0kb downstream 1.0kb downstream 3924 true scaffold_7: 28347366-28351289 Setaria italica
Seita.7G213400 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 28350290-28351289 Setaria italica
Seita.7G213400 2.0kb upstream 2.0kb upstream 4924 true scaffold_7: 28345366-28350289 Setaria italica
Seita.7G213400 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 28345366-28347365 Setaria italica
Seita.7G213400 2.0kb downstream 2.0kb downstream 4924 true scaffold_7: 28347366-28352289 Setaria italica
Seita.7G213400 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 28350290-28352289 Setaria italica
Seita.7G213400 5.0kb upstream 5.0kb upstream 7924 true scaffold_7: 28342366-28350289 Setaria italica
Seita.7G213400 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 28342366-28347365 Setaria italica
Seita.7G213400 5.0kb downstream 5.0kb downstream 7924 true scaffold_7: 28347366-28355289 Setaria italica
Seita.7G213400 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 28350290-28355289 Setaria italica
Seita.7G213400 10.0kb upstream 10.0kb upstream 12924 true scaffold_7: 28337366-28350289 Setaria italica
Seita.7G213400 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 28337366-28347365 Setaria italica
Seita.7G213400 10.0kb downstream 10.0kb downstream 12924 true scaffold_7: 28347366-28360289 Setaria italica
Seita.7G213400 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 28350290-28360289 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179899 5267 Panicoideae View MSA
124574450 5269 Grass View MSA
122047585 5273 Angiosperm View MSA
121347157 5274 Embryophyte View MSA
123426154 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.305     High  
cufflinks 12.452        
cufflinks 12.348     High  
cufflinks 11.793     High  
cufflinks 7.566       Low
cufflinks 12.62        
cufflinks 8.422        
cufflinks 9.822        
cufflinks 5.934       Low
cufflinks 7.265       Low
cufflinks 10.494        
cufflinks 15.288     High  
cufflinks 14.071     High  
cufflinks 11.463        
cufflinks 12.907        
cufflinks 10.336        
cufflinks 15.925     High High
cufflinks 20.722     High High
cufflinks 9.045        
cufflinks 13.88        

0 Strain