Gene : Seita.7G216700 S. italica v2.2
Defline:  (1 of 4) PTHR24223:SF165 - ABC TRANSPORTER C FAMILY MEMBER 15-RELATED Genomic Order:  2167
Name:  ? Seita.7G216700 Secondary Identifier:  ? PAC:32704501
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G216700 0.5kb upstream 0.5kb upstream 8549 true scaffold_7: 28528082-28536630 Setaria italica
Seita.7G216700 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 28528082-28528581 Setaria italica
Seita.7G216700 0.5kb downstream 0.5kb downstream 8549 true scaffold_7: 28528582-28537130 Setaria italica
Seita.7G216700 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 28536631-28537130 Setaria italica
Seita.7G216700 1.0kb upstream 1.0kb upstream 9049 true scaffold_7: 28527582-28536630 Setaria italica
Seita.7G216700 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 28527582-28528581 Setaria italica
Seita.7G216700 1.0kb downstream 1.0kb downstream 9049 true scaffold_7: 28528582-28537630 Setaria italica
Seita.7G216700 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 28536631-28537630 Setaria italica
Seita.7G216700 2.0kb upstream 2.0kb upstream 10049 true scaffold_7: 28526582-28536630 Setaria italica
Seita.7G216700 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 28526582-28528581 Setaria italica
Seita.7G216700 2.0kb downstream 2.0kb downstream 10049 true scaffold_7: 28528582-28538630 Setaria italica
Seita.7G216700 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 28536631-28538630 Setaria italica
Seita.7G216700 5.0kb upstream 5.0kb upstream 13049 true scaffold_7: 28523582-28536630 Setaria italica
Seita.7G216700 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 28523582-28528581 Setaria italica
Seita.7G216700 5.0kb downstream 5.0kb downstream 13049 true scaffold_7: 28528582-28541630 Setaria italica
Seita.7G216700 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 28536631-28541630 Setaria italica
Seita.7G216700 10.0kb upstream 10.0kb upstream 18049 true scaffold_7: 28518582-28536630 Setaria italica
Seita.7G216700 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 28518582-28528581 Setaria italica
Seita.7G216700 10.0kb downstream 10.0kb downstream 18049 true scaffold_7: 28528582-28546630 Setaria italica
Seita.7G216700 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 28536631-28546630 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189297 5267 Panicoideae View MSA
124584605 5269 Grass View MSA
122042216 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121309936 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.574        
cufflinks 7.246        
cufflinks 8.422        
cufflinks 4.444        
cufflinks 4.453        
cufflinks 6.872        
cufflinks 8.012        
cufflinks 6.844        
cufflinks 3.746        
cufflinks 7.799        
cufflinks 18.517     High High
cufflinks 12.924        
cufflinks 17.62     High High
cufflinks 16.044     High  
cufflinks 26.466     High High
cufflinks 1.792       Low
cufflinks 9.247        
cufflinks 0.978       Low
cufflinks 11.313     High  
cufflinks 4.43        

0 Strain