Gene : Seita.7G217300 S. italica v2.2
Genomic Order:  2173 Name:  ? Seita.7G217300
Secondary Identifier:  ? PAC:32704748
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G217300 0.5kb upstream 0.5kb upstream 1951 true scaffold_7: 28574020-28575970 Setaria italica
Seita.7G217300 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 28574020-28574519 Setaria italica
Seita.7G217300 0.5kb downstream 0.5kb downstream 1951 true scaffold_7: 28574520-28576470 Setaria italica
Seita.7G217300 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 28575971-28576470 Setaria italica
Seita.7G217300 1.0kb upstream 1.0kb upstream 2451 true scaffold_7: 28573520-28575970 Setaria italica
Seita.7G217300 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 28573520-28574519 Setaria italica
Seita.7G217300 1.0kb downstream 1.0kb downstream 2451 true scaffold_7: 28574520-28576970 Setaria italica
Seita.7G217300 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 28575971-28576970 Setaria italica
Seita.7G217300 2.0kb upstream 2.0kb upstream 3451 true scaffold_7: 28572520-28575970 Setaria italica
Seita.7G217300 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 28572520-28574519 Setaria italica
Seita.7G217300 2.0kb downstream 2.0kb downstream 3451 true scaffold_7: 28574520-28577970 Setaria italica
Seita.7G217300 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 28575971-28577970 Setaria italica
Seita.7G217300 5.0kb upstream 5.0kb upstream 6451 true scaffold_7: 28569520-28575970 Setaria italica
Seita.7G217300 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 28569520-28574519 Setaria italica
Seita.7G217300 5.0kb downstream 5.0kb downstream 6451 true scaffold_7: 28574520-28580970 Setaria italica
Seita.7G217300 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 28575971-28580970 Setaria italica
Seita.7G217300 10.0kb upstream 10.0kb upstream 11451 true scaffold_7: 28564520-28575970 Setaria italica
Seita.7G217300 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 28564520-28574519 Setaria italica
Seita.7G217300 10.0kb downstream 10.0kb downstream 11451 true scaffold_7: 28574520-28585970 Setaria italica
Seita.7G217300 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 28575971-28585970 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028162 5273 Angiosperm View MSA
122187801 5267 Panicoideae View MSA
124589577 5269 Grass View MSA
121297693 5274 Embryophyte View MSA
123335723 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.364       Low
cufflinks 7.983        
cufflinks 74.681     High High
cufflinks 137.286     High High
cufflinks 80.907     High High
cufflinks 10.513        
cufflinks 13.123        
cufflinks 41.104     High  
cufflinks 20.992     High  
cufflinks 34.335     High  
cufflinks 6.458       Low
cufflinks 14.357     High  
cufflinks 25.877     High  
cufflinks 84.859     High High
cufflinks 8.463        
cufflinks 7.633       Low
cufflinks 21.543     High  
cufflinks 9.665        
cufflinks 44.501     High  
cufflinks 12.273        

0 Strain