Gene : Seita.7G224400 S. italica v2.2
Defline:  (1 of 1) PTHR15948 - G-PROTEIN COUPLED RECEPTOR 89-RELATED Genomic Order:  2244
Name:  ? Seita.7G224400 Secondary Identifier:  ? PAC:32703593
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G224400 0.5kb upstream 0.5kb upstream 6787 true scaffold_7: 28989968-28996754 Setaria italica
Seita.7G224400 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 28996255-28996754 Setaria italica
Seita.7G224400 0.5kb downstream 0.5kb downstream 6787 true scaffold_7: 28989468-28996254 Setaria italica
Seita.7G224400 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 28989468-28989967 Setaria italica
Seita.7G224400 1.0kb upstream 1.0kb upstream 7287 true scaffold_7: 28989968-28997254 Setaria italica
Seita.7G224400 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 28996255-28997254 Setaria italica
Seita.7G224400 1.0kb downstream 1.0kb downstream 7287 true scaffold_7: 28988968-28996254 Setaria italica
Seita.7G224400 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 28988968-28989967 Setaria italica
Seita.7G224400 2.0kb upstream 2.0kb upstream 8287 true scaffold_7: 28989968-28998254 Setaria italica
Seita.7G224400 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 28996255-28998254 Setaria italica
Seita.7G224400 2.0kb downstream 2.0kb downstream 8287 true scaffold_7: 28987968-28996254 Setaria italica
Seita.7G224400 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 28987968-28989967 Setaria italica
Seita.7G224400 5.0kb upstream 5.0kb upstream 11287 true scaffold_7: 28989968-29001254 Setaria italica
Seita.7G224400 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 28996255-29001254 Setaria italica
Seita.7G224400 5.0kb downstream 5.0kb downstream 11287 true scaffold_7: 28984968-28996254 Setaria italica
Seita.7G224400 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 28984968-28989967 Setaria italica
Seita.7G224400 10.0kb upstream 10.0kb upstream 16287 true scaffold_7: 28989968-29006254 Setaria italica
Seita.7G224400 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 28996255-29006254 Setaria italica
Seita.7G224400 10.0kb downstream 10.0kb downstream 16287 true scaffold_7: 28979968-28996254 Setaria italica
Seita.7G224400 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 28979968-28989967 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176754 5267 Panicoideae View MSA
124568727 5269 Grass View MSA
122046537 5273 Angiosperm View MSA
121343919 5274 Embryophyte View MSA
123423956 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.704        
cufflinks 2.978        
cufflinks 1.961        
cufflinks 1.698       Low
cufflinks 1.35       Low
cufflinks 3.494       High
cufflinks 2.287        
cufflinks 2.536        
cufflinks 1.606       Low
cufflinks 2.356        
cufflinks 2.802        
cufflinks 2.91        
cufflinks 2.688        
cufflinks 1.963        
cufflinks 2.961        
cufflinks 2.221        
cufflinks 2.717        
cufflinks 2.358        
cufflinks 1.78       Low
cufflinks 3.03       High

0 Strain