Gene : Seita.7G226300 S. italica v2.2
Defline:  (1 of 1) 2.1.1.100 - Protein-S-isoprenylcysteine O-methyltransferase / Prenylcysteine carboxyl methyltransferase Genomic Order:  2263
Name:  ? Seita.7G226300 Secondary Identifier:  ? PAC:32703672
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G226300 0.5kb upstream 0.5kb upstream 3636 true scaffold_7: 29113454-29117089 Setaria italica
Seita.7G226300 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 29113454-29113953 Setaria italica
Seita.7G226300 0.5kb downstream 0.5kb downstream 3636 true scaffold_7: 29113954-29117589 Setaria italica
Seita.7G226300 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 29117090-29117589 Setaria italica
Seita.7G226300 1.0kb upstream 1.0kb upstream 4136 true scaffold_7: 29112954-29117089 Setaria italica
Seita.7G226300 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 29112954-29113953 Setaria italica
Seita.7G226300 1.0kb downstream 1.0kb downstream 4136 true scaffold_7: 29113954-29118089 Setaria italica
Seita.7G226300 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 29117090-29118089 Setaria italica
Seita.7G226300 2.0kb upstream 2.0kb upstream 5136 true scaffold_7: 29111954-29117089 Setaria italica
Seita.7G226300 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 29111954-29113953 Setaria italica
Seita.7G226300 2.0kb downstream 2.0kb downstream 5136 true scaffold_7: 29113954-29119089 Setaria italica
Seita.7G226300 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 29117090-29119089 Setaria italica
Seita.7G226300 5.0kb upstream 5.0kb upstream 8136 true scaffold_7: 29108954-29117089 Setaria italica
Seita.7G226300 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 29108954-29113953 Setaria italica
Seita.7G226300 5.0kb downstream 5.0kb downstream 8136 true scaffold_7: 29113954-29122089 Setaria italica
Seita.7G226300 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 29117090-29122089 Setaria italica
Seita.7G226300 10.0kb upstream 10.0kb upstream 13136 true scaffold_7: 29103954-29117089 Setaria italica
Seita.7G226300 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 29103954-29113953 Setaria italica
Seita.7G226300 10.0kb downstream 10.0kb downstream 13136 true scaffold_7: 29113954-29127089 Setaria italica
Seita.7G226300 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 29117090-29127089 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187656 5267 Panicoideae View MSA
124590185 5269 Grass View MSA
122050758 5273 Angiosperm View MSA
121345663 5274 Embryophyte View MSA
123424418 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.63        
cufflinks 4.685        
cufflinks 2.748       Low
cufflinks 3.635        
cufflinks 3.231       Low
cufflinks 4.609        
cufflinks 3.674        
cufflinks 4.434        
cufflinks 3.528        
cufflinks 3.762        
cufflinks 3.565        
cufflinks 5.648       High
cufflinks 5.033       High
cufflinks 2.85       Low
cufflinks 4.454        
cufflinks 4.277        
cufflinks 4.927       High
cufflinks 3.965        
cufflinks 3.287       Low
cufflinks 4.958       High

0 Strain