Gene : Seita.7G300700 S. italica v2.2
Defline:  (1 of 2) PTHR13902:SF49 - SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED Genomic Order:  3007
Name:  ? Seita.7G300700 Secondary Identifier:  ? PAC:32704634
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G300700 0.5kb upstream 0.5kb upstream 5816 true scaffold_7: 34110846-34116661 Setaria italica
Seita.7G300700 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 34116162-34116661 Setaria italica
Seita.7G300700 0.5kb downstream 0.5kb downstream 5816 true scaffold_7: 34110346-34116161 Setaria italica
Seita.7G300700 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 34110346-34110845 Setaria italica
Seita.7G300700 1.0kb upstream 1.0kb upstream 6316 true scaffold_7: 34110846-34117161 Setaria italica
Seita.7G300700 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 34116162-34117161 Setaria italica
Seita.7G300700 1.0kb downstream 1.0kb downstream 6316 true scaffold_7: 34109846-34116161 Setaria italica
Seita.7G300700 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 34109846-34110845 Setaria italica
Seita.7G300700 2.0kb upstream 2.0kb upstream 7316 true scaffold_7: 34110846-34118161 Setaria italica
Seita.7G300700 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 34116162-34118161 Setaria italica
Seita.7G300700 2.0kb downstream 2.0kb downstream 7316 true scaffold_7: 34108846-34116161 Setaria italica
Seita.7G300700 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 34108846-34110845 Setaria italica
Seita.7G300700 5.0kb upstream 5.0kb upstream 10316 true scaffold_7: 34110846-34121161 Setaria italica
Seita.7G300700 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 34116162-34121161 Setaria italica
Seita.7G300700 5.0kb downstream 5.0kb downstream 10316 true scaffold_7: 34105846-34116161 Setaria italica
Seita.7G300700 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 34105846-34110845 Setaria italica
Seita.7G300700 10.0kb upstream 10.0kb upstream 15316 true scaffold_7: 34110846-34126161 Setaria italica
Seita.7G300700 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 34116162-34126161 Setaria italica
Seita.7G300700 10.0kb downstream 10.0kb downstream 15316 true scaffold_7: 34100846-34116161 Setaria italica
Seita.7G300700 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 34100846-34110845 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188754 5267 Panicoideae View MSA
124587286 5269 Grass View MSA
122041830 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121309892 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.381       Low
cufflinks 1.204       Low
cufflinks 13.162     High High
cufflinks 8.25        
cufflinks 5.747        
cufflinks 2.145        
cufflinks 4.69        
cufflinks 3.328        
cufflinks 3.927        
cufflinks 2.119        
cufflinks 2.545        
cufflinks 1.244       Low
cufflinks 5.064        
cufflinks 16.809     High High
cufflinks 5.774        
cufflinks 5.622        
cufflinks 5.996        
cufflinks 1.653       Low
cufflinks 17.007     High High
cufflinks 3.543        

0 Strain