Gene : Seita.7G299000 S. italica v2.2
Genomic Order:  2990 Name:  ? Seita.7G299000
Secondary Identifier:  ? PAC:32702613
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G299000 0.5kb upstream 0.5kb upstream 1401 true scaffold_7: 33986020-33987420 Setaria italica
Seita.7G299000 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 33986921-33987420 Setaria italica
Seita.7G299000 0.5kb downstream 0.5kb downstream 1401 true scaffold_7: 33985520-33986920 Setaria italica
Seita.7G299000 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 33985520-33986019 Setaria italica
Seita.7G299000 1.0kb upstream 1.0kb upstream 1901 true scaffold_7: 33986020-33987920 Setaria italica
Seita.7G299000 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 33986921-33987920 Setaria italica
Seita.7G299000 1.0kb downstream 1.0kb downstream 1901 true scaffold_7: 33985020-33986920 Setaria italica
Seita.7G299000 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 33985020-33986019 Setaria italica
Seita.7G299000 2.0kb upstream 2.0kb upstream 2901 true scaffold_7: 33986020-33988920 Setaria italica
Seita.7G299000 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 33986921-33988920 Setaria italica
Seita.7G299000 2.0kb downstream 2.0kb downstream 2901 true scaffold_7: 33984020-33986920 Setaria italica
Seita.7G299000 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 33984020-33986019 Setaria italica
Seita.7G299000 5.0kb upstream 5.0kb upstream 5901 true scaffold_7: 33986020-33991920 Setaria italica
Seita.7G299000 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 33986921-33991920 Setaria italica
Seita.7G299000 5.0kb downstream 5.0kb downstream 5901 true scaffold_7: 33981020-33986920 Setaria italica
Seita.7G299000 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 33981020-33986019 Setaria italica
Seita.7G299000 10.0kb upstream 10.0kb upstream 10901 true scaffold_7: 33986020-33996920 Setaria italica
Seita.7G299000 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 33986921-33996920 Setaria italica
Seita.7G299000 10.0kb downstream 10.0kb downstream 10901 true scaffold_7: 33976020-33986920 Setaria italica
Seita.7G299000 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 33976020-33986019 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121795001 5273 Angiosperm Singleton cluster - no MSA
122054617 5267 Panicoideae Singleton cluster - no MSA
124354436 5269 Grass Singleton cluster - no MSA
121066174 5274 Embryophyte Singleton cluster - no MSA
123105834 5275 Viridiplantae Singleton cluster - no MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.31        
cufflinks 0.504        
cufflinks 0.393        
cufflinks 0.492        
cufflinks 0.46        
cufflinks 0.576        
cufflinks 0.415        
cufflinks 0.484        
cufflinks 0.369        
cufflinks 0.093     Low Low
cufflinks 0.524        
cufflinks 0.51        
cufflinks 0.447        
cufflinks 0.526        
cufflinks 0.798       High
cufflinks 0.482        
cufflinks 0.437        
cufflinks 0.342        
cufflinks 0.643        
cufflinks 0.375        

0 Strain