Gene : Seita.7G305000 S. italica v2.2
Defline:  (1 of 42) PF04525 - LURP-one-related (LOR) Genomic Order:  3050
Name:  ? Seita.7G305000 Secondary Identifier:  ? PAC:32703906
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G305000 0.5kb upstream 0.5kb upstream 2093 true scaffold_7: 34323365-34325457 Setaria italica
Seita.7G305000 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 34324958-34325457 Setaria italica
Seita.7G305000 0.5kb downstream 0.5kb downstream 2093 true scaffold_7: 34322865-34324957 Setaria italica
Seita.7G305000 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 34322865-34323364 Setaria italica
Seita.7G305000 1.0kb upstream 1.0kb upstream 2593 true scaffold_7: 34323365-34325957 Setaria italica
Seita.7G305000 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 34324958-34325957 Setaria italica
Seita.7G305000 1.0kb downstream 1.0kb downstream 2593 true scaffold_7: 34322365-34324957 Setaria italica
Seita.7G305000 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 34322365-34323364 Setaria italica
Seita.7G305000 2.0kb upstream 2.0kb upstream 3593 true scaffold_7: 34323365-34326957 Setaria italica
Seita.7G305000 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 34324958-34326957 Setaria italica
Seita.7G305000 2.0kb downstream 2.0kb downstream 3593 true scaffold_7: 34321365-34324957 Setaria italica
Seita.7G305000 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 34321365-34323364 Setaria italica
Seita.7G305000 5.0kb upstream 5.0kb upstream 6593 true scaffold_7: 34323365-34329957 Setaria italica
Seita.7G305000 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 34324958-34329957 Setaria italica
Seita.7G305000 5.0kb downstream 5.0kb downstream 6593 true scaffold_7: 34318365-34324957 Setaria italica
Seita.7G305000 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 34318365-34323364 Setaria italica
Seita.7G305000 10.0kb upstream 10.0kb upstream 11593 true scaffold_7: 34323365-34334957 Setaria italica
Seita.7G305000 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 34324958-34334957 Setaria italica
Seita.7G305000 10.0kb downstream 10.0kb downstream 11593 true scaffold_7: 34313365-34324957 Setaria italica
Seita.7G305000 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 34313365-34323364 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190556 5267 Panicoideae View MSA
124583669 5269 Grass View MSA
122048664 5273 Angiosperm View MSA
121311063 5274 Embryophyte View MSA
123348415 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.053     Low  
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low  
cufflinks 0.022     Low  
cufflinks 0.03     Low  
cufflinks 0.013     Low Low
cufflinks 0.689        
cufflinks 0.054     Low  
cufflinks 1.102        
cufflinks 0.314        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.972       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.097       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.445       High

0 Strain