Gene : Seita.7G305300 S. italica v2.2
Defline:  (1 of 3) 2.7.7.14 - Ethanolamine-phosphate cytidylyltransferase / Phosphorylethanolamine transferase Genomic Order:  3053
Name:  ? Seita.7G305300 Secondary Identifier:  ? PAC:32703313
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sitalica PWY4FS-6 Setaria italica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G305300 0.5kb upstream 0.5kb upstream 5865 true scaffold_7: 34340425-34346289 Setaria italica
Seita.7G305300 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 34345790-34346289 Setaria italica
Seita.7G305300 0.5kb downstream 0.5kb downstream 5865 true scaffold_7: 34339925-34345789 Setaria italica
Seita.7G305300 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 34339925-34340424 Setaria italica
Seita.7G305300 1.0kb upstream 1.0kb upstream 6365 true scaffold_7: 34340425-34346789 Setaria italica
Seita.7G305300 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 34345790-34346789 Setaria italica
Seita.7G305300 1.0kb downstream 1.0kb downstream 6365 true scaffold_7: 34339425-34345789 Setaria italica
Seita.7G305300 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 34339425-34340424 Setaria italica
Seita.7G305300 2.0kb upstream 2.0kb upstream 7365 true scaffold_7: 34340425-34347789 Setaria italica
Seita.7G305300 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 34345790-34347789 Setaria italica
Seita.7G305300 2.0kb downstream 2.0kb downstream 7365 true scaffold_7: 34338425-34345789 Setaria italica
Seita.7G305300 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 34338425-34340424 Setaria italica
Seita.7G305300 5.0kb upstream 5.0kb upstream 10365 true scaffold_7: 34340425-34350789 Setaria italica
Seita.7G305300 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 34345790-34350789 Setaria italica
Seita.7G305300 5.0kb downstream 5.0kb downstream 10365 true scaffold_7: 34335425-34345789 Setaria italica
Seita.7G305300 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 34335425-34340424 Setaria italica
Seita.7G305300 10.0kb upstream 10.0kb upstream 15365 true scaffold_7: 34340425-34355789 Setaria italica
Seita.7G305300 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 34345790-34355789 Setaria italica
Seita.7G305300 10.0kb downstream 10.0kb downstream 15365 true scaffold_7: 34330425-34345789 Setaria italica
Seita.7G305300 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 34330425-34340424 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194313 5267 Panicoideae View MSA
124578458 5269 Grass View MSA
122041937 5273 Angiosperm View MSA
121349404 5274 Embryophyte View MSA
123426391 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.748        
cufflinks 5.844       High
cufflinks 1.595       Low
cufflinks 1.331       Low
cufflinks 1.641       Low
cufflinks 5.932       High
cufflinks 3.787        
cufflinks 3.528        
cufflinks 2.978        
cufflinks 5.613       High
cufflinks 4.156        
cufflinks 3.472        
cufflinks 3.048        
cufflinks 1.966       Low
cufflinks 3.725        
cufflinks 3.443        
cufflinks 3.639        
cufflinks 3.5        
cufflinks 1.965       Low
cufflinks 3.63        

0 Strain