Gene : Seita.7G319100 S. italica v2.2
Defline:  (1 of 1) 2.4.1.116 - Cyanidin 3-O-rutinoside 5-O-glucosyltransferase / glucosyltransferase Genomic Order:  3191
Name:  ? Seita.7G319100 Secondary Identifier:  ? PAC:32703829
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sitalica PWY-5139 Setaria italica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G319100 0.5kb upstream 0.5kb upstream 1955 true scaffold_7: 35089554-35091508 Setaria italica
Seita.7G319100 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 35091009-35091508 Setaria italica
Seita.7G319100 0.5kb downstream 0.5kb downstream 1955 true scaffold_7: 35089054-35091008 Setaria italica
Seita.7G319100 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 35089054-35089553 Setaria italica
Seita.7G319100 1.0kb upstream 1.0kb upstream 2455 true scaffold_7: 35089554-35092008 Setaria italica
Seita.7G319100 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 35091009-35092008 Setaria italica
Seita.7G319100 1.0kb downstream 1.0kb downstream 2455 true scaffold_7: 35088554-35091008 Setaria italica
Seita.7G319100 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 35088554-35089553 Setaria italica
Seita.7G319100 2.0kb upstream 2.0kb upstream 3455 true scaffold_7: 35089554-35093008 Setaria italica
Seita.7G319100 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 35091009-35093008 Setaria italica
Seita.7G319100 2.0kb downstream 2.0kb downstream 3455 true scaffold_7: 35087554-35091008 Setaria italica
Seita.7G319100 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 35087554-35089553 Setaria italica
Seita.7G319100 5.0kb upstream 5.0kb upstream 6455 true scaffold_7: 35089554-35096008 Setaria italica
Seita.7G319100 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 35091009-35096008 Setaria italica
Seita.7G319100 5.0kb downstream 5.0kb downstream 6455 true scaffold_7: 35084554-35091008 Setaria italica
Seita.7G319100 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 35084554-35089553 Setaria italica
Seita.7G319100 10.0kb upstream 10.0kb upstream 11455 true scaffold_7: 35089554-35101008 Setaria italica
Seita.7G319100 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 35091009-35101008 Setaria italica
Seita.7G319100 10.0kb downstream 10.0kb downstream 11455 true scaffold_7: 35079554-35091008 Setaria italica
Seita.7G319100 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 35079554-35089553 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041128 5273 Angiosperm View MSA
122199793 5267 Panicoideae View MSA
124584467 5269 Grass View MSA
121309799 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.728     High  
cufflinks 4.812       Low
cufflinks 44.737     High  
cufflinks 41.076     High  
cufflinks 29.734     High  
cufflinks 6.64       Low
cufflinks 22.696     High  
cufflinks 37.311     High  
cufflinks 16.014     High  
cufflinks 19.901     High  
cufflinks 25.831     High  
cufflinks 24.01     High  
cufflinks 26.14     High  
cufflinks 52.95     High High
cufflinks 13.13        
cufflinks 30.33     High  
cufflinks 24.359     High  
cufflinks 55.096     High High
cufflinks 56.534     High High
cufflinks 12.322       Low

0 Strain