Gene : Seita.7G320600 S. italica v2.2
Defline:  (1 of 4) 2.7.1.3 - Ketohexokinase / Hepatic fructokinase Genomic Order:  3206
Name:  ? Seita.7G320600 Secondary Identifier:  ? PAC:32705674
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sitalica PWY66-373 Setaria italica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G320600 0.5kb upstream 0.5kb upstream 3794 true scaffold_7: 35168640-35172433 Setaria italica
Seita.7G320600 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 35171934-35172433 Setaria italica
Seita.7G320600 0.5kb downstream 0.5kb downstream 3794 true scaffold_7: 35168140-35171933 Setaria italica
Seita.7G320600 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 35168140-35168639 Setaria italica
Seita.7G320600 1.0kb upstream 1.0kb upstream 4294 true scaffold_7: 35168640-35172933 Setaria italica
Seita.7G320600 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 35171934-35172933 Setaria italica
Seita.7G320600 1.0kb downstream 1.0kb downstream 4294 true scaffold_7: 35167640-35171933 Setaria italica
Seita.7G320600 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 35167640-35168639 Setaria italica
Seita.7G320600 2.0kb upstream 2.0kb upstream 5294 true scaffold_7: 35168640-35173933 Setaria italica
Seita.7G320600 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 35171934-35173933 Setaria italica
Seita.7G320600 2.0kb downstream 2.0kb downstream 5294 true scaffold_7: 35166640-35171933 Setaria italica
Seita.7G320600 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 35166640-35168639 Setaria italica
Seita.7G320600 5.0kb upstream 5.0kb upstream 8294 true scaffold_7: 35168640-35176933 Setaria italica
Seita.7G320600 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 35171934-35176933 Setaria italica
Seita.7G320600 5.0kb downstream 5.0kb downstream 8294 true scaffold_7: 35163640-35171933 Setaria italica
Seita.7G320600 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 35163640-35168639 Setaria italica
Seita.7G320600 10.0kb upstream 10.0kb upstream 13294 true scaffold_7: 35168640-35181933 Setaria italica
Seita.7G320600 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 35171934-35181933 Setaria italica
Seita.7G320600 10.0kb downstream 10.0kb downstream 13294 true scaffold_7: 35158640-35171933 Setaria italica
Seita.7G320600 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 35158640-35168639 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190109 5267 Panicoideae View MSA
124570454 5269 Grass View MSA
122044169 5273 Angiosperm View MSA
121347285 5274 Embryophyte View MSA
123428634 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.576        
cufflinks 5.372        
cufflinks 12.87     High High
cufflinks 7.177        
cufflinks 4.406       Low
cufflinks 4.963        
cufflinks 3.766       Low
cufflinks 8.149        
cufflinks 2.831       Low
cufflinks 7.085        
cufflinks 6.357        
cufflinks 6.169        
cufflinks 6.531        
cufflinks 11.833       High
cufflinks 7.24        
cufflinks 5.03        
cufflinks 7.403        
cufflinks 5.95        
cufflinks 5.94        
cufflinks 6.807        

0 Strain