Gene : Seita.7G324800 S. italica v2.2
Defline:  (1 of 2) PTHR11362:SF13 - PROTEIN TERMINAL FLOWER 1 Genomic Order:  3248
Name:  ? Seita.7G324800 Secondary Identifier:  ? PAC:32701972
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G324800 0.5kb upstream 0.5kb upstream 2188 true scaffold_7: 35435645-35437832 Setaria italica
Seita.7G324800 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 35437333-35437832 Setaria italica
Seita.7G324800 0.5kb downstream 0.5kb downstream 2188 true scaffold_7: 35435145-35437332 Setaria italica
Seita.7G324800 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 35435145-35435644 Setaria italica
Seita.7G324800 1.0kb upstream 1.0kb upstream 2688 true scaffold_7: 35435645-35438332 Setaria italica
Seita.7G324800 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 35437333-35438332 Setaria italica
Seita.7G324800 1.0kb downstream 1.0kb downstream 2688 true scaffold_7: 35434645-35437332 Setaria italica
Seita.7G324800 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 35434645-35435644 Setaria italica
Seita.7G324800 2.0kb upstream 2.0kb upstream 3688 true scaffold_7: 35435645-35439332 Setaria italica
Seita.7G324800 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 35437333-35439332 Setaria italica
Seita.7G324800 2.0kb downstream 2.0kb downstream 3688 true scaffold_7: 35433645-35437332 Setaria italica
Seita.7G324800 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 35433645-35435644 Setaria italica
Seita.7G324800 5.0kb upstream 5.0kb upstream 6688 true scaffold_7: 35435645-35442332 Setaria italica
Seita.7G324800 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 35437333-35442332 Setaria italica
Seita.7G324800 5.0kb downstream 5.0kb downstream 6688 true scaffold_7: 35430645-35437332 Setaria italica
Seita.7G324800 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 35430645-35435644 Setaria italica
Seita.7G324800 10.0kb upstream 10.0kb upstream 11688 true scaffold_7: 35435645-35447332 Setaria italica
Seita.7G324800 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 35437333-35447332 Setaria italica
Seita.7G324800 10.0kb downstream 10.0kb downstream 11688 true scaffold_7: 35425645-35437332 Setaria italica
Seita.7G324800 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 35425645-35435644 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122064606 5267 Panicoideae View MSA
124590595 5269 Grass View MSA
122043822 5273 Angiosperm View MSA
123429087 5275 Viridiplantae View MSA
121348505 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.415        
cufflinks 0.141        
cufflinks 0.026     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.69        
cufflinks 1.845        
cufflinks 0.258        
cufflinks 4.048        
cufflinks 6.955       High
cufflinks 1.977        
cufflinks 7.799       High
cufflinks 0.064     Low  
cufflinks 15.184     High High
cufflinks 0.046     Low Low
cufflinks 10.197       High
cufflinks 0.023     Low Low
cufflinks 0.084     Low  
cufflinks 3.048        

0 Strain