Gene : Seita.7G326600 S. italica v2.2
Defline:  (1 of 11) PF11250 - Fantastic Four meristem regulator (FAF) Genomic Order:  3266
Name:  ? Seita.7G326600 Secondary Identifier:  ? PAC:32702739
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G326600 0.5kb upstream 0.5kb upstream 2473 true scaffold_7: 35508591-35511063 Setaria italica
Seita.7G326600 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 35510564-35511063 Setaria italica
Seita.7G326600 0.5kb downstream 0.5kb downstream 2473 true scaffold_7: 35508091-35510563 Setaria italica
Seita.7G326600 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 35508091-35508590 Setaria italica
Seita.7G326600 1.0kb upstream 1.0kb upstream 2973 true scaffold_7: 35508591-35511563 Setaria italica
Seita.7G326600 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 35510564-35511563 Setaria italica
Seita.7G326600 1.0kb downstream 1.0kb downstream 2973 true scaffold_7: 35507591-35510563 Setaria italica
Seita.7G326600 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 35507591-35508590 Setaria italica
Seita.7G326600 2.0kb upstream 2.0kb upstream 3973 true scaffold_7: 35508591-35512563 Setaria italica
Seita.7G326600 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 35510564-35512563 Setaria italica
Seita.7G326600 2.0kb downstream 2.0kb downstream 3973 true scaffold_7: 35506591-35510563 Setaria italica
Seita.7G326600 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 35506591-35508590 Setaria italica
Seita.7G326600 5.0kb upstream 5.0kb upstream 6973 true scaffold_7: 35508591-35515563 Setaria italica
Seita.7G326600 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 35510564-35515563 Setaria italica
Seita.7G326600 5.0kb downstream 5.0kb downstream 6973 true scaffold_7: 35503591-35510563 Setaria italica
Seita.7G326600 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 35503591-35508590 Setaria italica
Seita.7G326600 10.0kb upstream 10.0kb upstream 11973 true scaffold_7: 35508591-35520563 Setaria italica
Seita.7G326600 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 35510564-35520563 Setaria italica
Seita.7G326600 10.0kb downstream 10.0kb downstream 11973 true scaffold_7: 35498591-35510563 Setaria italica
Seita.7G326600 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 35498591-35508590 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192119 5267 Panicoideae View MSA
124584437 5269 Grass View MSA
122048900 5273 Angiosperm View MSA
121311160 5274 Embryophyte View MSA
123348494 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.079     Low Low
cufflinks 0.61        
cufflinks 1.434        
cufflinks 1.072        
cufflinks 0.489        
cufflinks 0.632        
cufflinks 1.269        
cufflinks 1.786        
cufflinks 0.343        
cufflinks 0.603        
cufflinks 0.265        
cufflinks 0.051     Low Low
cufflinks 0.035     Low Low
cufflinks 5.3       High
cufflinks 0.392        
cufflinks 1.163        
cufflinks 0.019     Low Low
cufflinks 0.127        
cufflinks 3.448       High
cufflinks 0.139        

0 Strain