Gene : Seita.7G327700 S. italica v2.2
Defline:  (1 of 2) PTHR13073 - GCN5-RELATED Genomic Order:  3277
Name:  ? Seita.7G327700 Secondary Identifier:  ? PAC:32702008
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G327700 0.5kb upstream 0.5kb upstream 2344 true scaffold_7: 35569596-35571939 Setaria italica
Seita.7G327700 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 35569596-35570095 Setaria italica
Seita.7G327700 0.5kb downstream 0.5kb downstream 2344 true scaffold_7: 35570096-35572439 Setaria italica
Seita.7G327700 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 35571940-35572439 Setaria italica
Seita.7G327700 1.0kb upstream 1.0kb upstream 2844 true scaffold_7: 35569096-35571939 Setaria italica
Seita.7G327700 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 35569096-35570095 Setaria italica
Seita.7G327700 1.0kb downstream 1.0kb downstream 2844 true scaffold_7: 35570096-35572939 Setaria italica
Seita.7G327700 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 35571940-35572939 Setaria italica
Seita.7G327700 2.0kb upstream 2.0kb upstream 3844 true scaffold_7: 35568096-35571939 Setaria italica
Seita.7G327700 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 35568096-35570095 Setaria italica
Seita.7G327700 2.0kb downstream 2.0kb downstream 3844 true scaffold_7: 35570096-35573939 Setaria italica
Seita.7G327700 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 35571940-35573939 Setaria italica
Seita.7G327700 5.0kb upstream 5.0kb upstream 6844 true scaffold_7: 35565096-35571939 Setaria italica
Seita.7G327700 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 35565096-35570095 Setaria italica
Seita.7G327700 5.0kb downstream 5.0kb downstream 6844 true scaffold_7: 35570096-35576939 Setaria italica
Seita.7G327700 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 35571940-35576939 Setaria italica
Seita.7G327700 10.0kb upstream 10.0kb upstream 11844 true scaffold_7: 35560096-35571939 Setaria italica
Seita.7G327700 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 35560096-35570095 Setaria italica
Seita.7G327700 10.0kb downstream 10.0kb downstream 11844 true scaffold_7: 35570096-35581939 Setaria italica
Seita.7G327700 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 35571940-35581939 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122116731 5267 Panicoideae View MSA
124411149 5269 Grass View MSA
122042285 5273 Angiosperm View MSA
121346098 5274 Embryophyte View MSA
123425317 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.295       High
cufflinks 2.91       High
cufflinks 1.87        
cufflinks 2.156        
cufflinks 1.681        
cufflinks 2.744        
cufflinks 2.699        
cufflinks 1.756        
cufflinks 1.285       Low
cufflinks 2.189        
cufflinks 1.833        
cufflinks 1.048       Low
cufflinks 1.804        
cufflinks 1.739        
cufflinks 2.99       High
cufflinks 3.184       High
cufflinks 2.173        
cufflinks 1.718        
cufflinks 1.743        
cufflinks 1.892        

0 Strain