Gene : Seita.7G330900 S. italica v2.2
Defline:  (1 of 2) PTHR21576:SF7 - MAJOR FACILITATOR PROTEIN-RELATED Genomic Order:  3309
Name:  ? Seita.7G330900 Secondary Identifier:  ? PAC:32706032
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G330900 0.5kb upstream 0.5kb upstream 4723 true scaffold_7: 35702474-35707196 Setaria italica
Seita.7G330900 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 35706697-35707196 Setaria italica
Seita.7G330900 0.5kb downstream 0.5kb downstream 4723 true scaffold_7: 35701974-35706696 Setaria italica
Seita.7G330900 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 35701974-35702473 Setaria italica
Seita.7G330900 1.0kb upstream 1.0kb upstream 5223 true scaffold_7: 35702474-35707696 Setaria italica
Seita.7G330900 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 35706697-35707696 Setaria italica
Seita.7G330900 1.0kb downstream 1.0kb downstream 5223 true scaffold_7: 35701474-35706696 Setaria italica
Seita.7G330900 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 35701474-35702473 Setaria italica
Seita.7G330900 2.0kb upstream 2.0kb upstream 6223 true scaffold_7: 35702474-35708696 Setaria italica
Seita.7G330900 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 35706697-35708696 Setaria italica
Seita.7G330900 2.0kb downstream 2.0kb downstream 6223 true scaffold_7: 35700474-35706696 Setaria italica
Seita.7G330900 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 35700474-35702473 Setaria italica
Seita.7G330900 5.0kb upstream 5.0kb upstream 9223 true scaffold_7: 35702474-35711696 Setaria italica
Seita.7G330900 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 35706697-35711696 Setaria italica
Seita.7G330900 5.0kb downstream 5.0kb downstream 9223 true scaffold_7: 35697474-35706696 Setaria italica
Seita.7G330900 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 35697474-35702473 Setaria italica
Seita.7G330900 10.0kb upstream 10.0kb upstream 14223 true scaffold_7: 35702474-35716696 Setaria italica
Seita.7G330900 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 35706697-35716696 Setaria italica
Seita.7G330900 10.0kb downstream 10.0kb downstream 14223 true scaffold_7: 35692474-35706696 Setaria italica
Seita.7G330900 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 35692474-35702473 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041179 5273 Angiosperm View MSA
122191279 5267 Panicoideae View MSA
124581874 5269 Grass View MSA
123429121 5275 Viridiplantae View MSA
121309810 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.023     Low Low
cufflinks 0.312        
cufflinks 0.142        
cufflinks 0.167        
cufflinks 0.13        
cufflinks 0.18        
cufflinks 0.193        
cufflinks 0.118     Low  
cufflinks 0.049     Low  
cufflinks 0.02     Low Low
cufflinks 0.01     Low Low
cufflinks 0.067     Low  
cufflinks 0.048     Low  
cufflinks 0.305        
cufflinks 0.11     Low  
cufflinks 0.61       High
cufflinks 0.084     Low  
cufflinks 0.024     Low Low
cufflinks 1.372       High
cufflinks 0.146        

0 Strain