Gene : Seita.7G333300 S. italica v2.2
Defline:  (1 of 5) PF11960 - Domain of unknown function (DUF3474) (DUF3474) Genomic Order:  3333
Name:  ? Seita.7G333300 Secondary Identifier:  ? PAC:32704827
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G333300 0.5kb upstream 0.5kb upstream 4906 true scaffold_7: 35811406-35816311 Setaria italica
Seita.7G333300 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 35815812-35816311 Setaria italica
Seita.7G333300 0.5kb downstream 0.5kb downstream 4906 true scaffold_7: 35810906-35815811 Setaria italica
Seita.7G333300 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 35810906-35811405 Setaria italica
Seita.7G333300 1.0kb upstream 1.0kb upstream 5406 true scaffold_7: 35811406-35816811 Setaria italica
Seita.7G333300 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 35815812-35816811 Setaria italica
Seita.7G333300 1.0kb downstream 1.0kb downstream 5406 true scaffold_7: 35810406-35815811 Setaria italica
Seita.7G333300 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 35810406-35811405 Setaria italica
Seita.7G333300 2.0kb upstream 2.0kb upstream 6406 true scaffold_7: 35811406-35817811 Setaria italica
Seita.7G333300 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 35815812-35817811 Setaria italica
Seita.7G333300 2.0kb downstream 2.0kb downstream 6406 true scaffold_7: 35809406-35815811 Setaria italica
Seita.7G333300 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 35809406-35811405 Setaria italica
Seita.7G333300 5.0kb upstream 5.0kb upstream 9406 true scaffold_7: 35811406-35820811 Setaria italica
Seita.7G333300 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 35815812-35820811 Setaria italica
Seita.7G333300 5.0kb downstream 5.0kb downstream 9406 true scaffold_7: 35806406-35815811 Setaria italica
Seita.7G333300 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 35806406-35811405 Setaria italica
Seita.7G333300 10.0kb upstream 10.0kb upstream 14406 true scaffold_7: 35811406-35825811 Setaria italica
Seita.7G333300 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 35815812-35825811 Setaria italica
Seita.7G333300 10.0kb downstream 10.0kb downstream 14406 true scaffold_7: 35801406-35815811 Setaria italica
Seita.7G333300 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 35801406-35811405 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122019953 5273 Angiosperm View MSA
122193070 5267 Panicoideae View MSA
124581434 5269 Grass View MSA
121351532 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.427        
cufflinks 3.68        
cufflinks 2.45        
cufflinks 1.311        
cufflinks 1.39        
cufflinks 5.184        
cufflinks 1.947        
cufflinks 7.139       High
cufflinks 4.216        
cufflinks 3.083        
cufflinks 3.591        
cufflinks 3.171        
cufflinks 2.15        
cufflinks 4.179        
cufflinks 7.144       High
cufflinks 0.327       Low
cufflinks 6.832       High
cufflinks 0.39       Low
cufflinks 1.157        
cufflinks 8.921       High

0 Strain