Gene : Seita.7G263100 S. italica v2.2
Defline:  (1 of 1) PTHR31580:SF3 - FILAMENT-LIKE PLANT PROTEIN 7 Genomic Order:  2631
Name:  ? Seita.7G263100 Secondary Identifier:  ? PAC:32702013
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G263100 0.5kb upstream 0.5kb upstream 6681 true scaffold_7: 31570159-31576839 Setaria italica
Seita.7G263100 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 31570159-31570658 Setaria italica
Seita.7G263100 0.5kb downstream 0.5kb downstream 6681 true scaffold_7: 31570659-31577339 Setaria italica
Seita.7G263100 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 31576840-31577339 Setaria italica
Seita.7G263100 1.0kb upstream 1.0kb upstream 7181 true scaffold_7: 31569659-31576839 Setaria italica
Seita.7G263100 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 31569659-31570658 Setaria italica
Seita.7G263100 1.0kb downstream 1.0kb downstream 7181 true scaffold_7: 31570659-31577839 Setaria italica
Seita.7G263100 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 31576840-31577839 Setaria italica
Seita.7G263100 2.0kb upstream 2.0kb upstream 8181 true scaffold_7: 31568659-31576839 Setaria italica
Seita.7G263100 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 31568659-31570658 Setaria italica
Seita.7G263100 2.0kb downstream 2.0kb downstream 8181 true scaffold_7: 31570659-31578839 Setaria italica
Seita.7G263100 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 31576840-31578839 Setaria italica
Seita.7G263100 5.0kb upstream 5.0kb upstream 11181 true scaffold_7: 31565659-31576839 Setaria italica
Seita.7G263100 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 31565659-31570658 Setaria italica
Seita.7G263100 5.0kb downstream 5.0kb downstream 11181 true scaffold_7: 31570659-31581839 Setaria italica
Seita.7G263100 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 31576840-31581839 Setaria italica
Seita.7G263100 10.0kb upstream 10.0kb upstream 16181 true scaffold_7: 31560659-31576839 Setaria italica
Seita.7G263100 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 31560659-31570658 Setaria italica
Seita.7G263100 10.0kb downstream 10.0kb downstream 16181 true scaffold_7: 31570659-31586839 Setaria italica
Seita.7G263100 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 31576840-31586839 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198192 5267 Panicoideae View MSA
124575267 5269 Grass View MSA
122048583 5273 Angiosperm View MSA
121351576 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.305       High
cufflinks 4.698        
cufflinks 0.219       Low
cufflinks 0.143       Low
cufflinks 0.237       Low
cufflinks 4.879        
cufflinks 5.274        
cufflinks 4.41        
cufflinks 5.182        
cufflinks 1.657        
cufflinks 5.045        
cufflinks 1.656        
cufflinks 1.648        
cufflinks 0.188       Low
cufflinks 1.969        
cufflinks 7.636       High
cufflinks 1.556        
cufflinks 4.639        
cufflinks 0.13       Low
cufflinks 2.117        

0 Strain