Gene : Seita.7G262100 S. italica v2.2
Defline:  (1 of 1) 2.7.1.30 - Glycerol kinase / Glycerokinase Genomic Order:  2621
Name:  ? Seita.7G262100 Secondary Identifier:  ? PAC:32705817
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sitalica PWY-4261 Setaria italica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G262100 0.5kb upstream 0.5kb upstream 4221 true scaffold_7: 31477485-31481705 Setaria italica
Seita.7G262100 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 31481206-31481705 Setaria italica
Seita.7G262100 0.5kb downstream 0.5kb downstream 4221 true scaffold_7: 31476985-31481205 Setaria italica
Seita.7G262100 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 31476985-31477484 Setaria italica
Seita.7G262100 1.0kb upstream 1.0kb upstream 4721 true scaffold_7: 31477485-31482205 Setaria italica
Seita.7G262100 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 31481206-31482205 Setaria italica
Seita.7G262100 1.0kb downstream 1.0kb downstream 4721 true scaffold_7: 31476485-31481205 Setaria italica
Seita.7G262100 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 31476485-31477484 Setaria italica
Seita.7G262100 2.0kb upstream 2.0kb upstream 5721 true scaffold_7: 31477485-31483205 Setaria italica
Seita.7G262100 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 31481206-31483205 Setaria italica
Seita.7G262100 2.0kb downstream 2.0kb downstream 5721 true scaffold_7: 31475485-31481205 Setaria italica
Seita.7G262100 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 31475485-31477484 Setaria italica
Seita.7G262100 5.0kb upstream 5.0kb upstream 8721 true scaffold_7: 31477485-31486205 Setaria italica
Seita.7G262100 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 31481206-31486205 Setaria italica
Seita.7G262100 5.0kb downstream 5.0kb downstream 8721 true scaffold_7: 31472485-31481205 Setaria italica
Seita.7G262100 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 31472485-31477484 Setaria italica
Seita.7G262100 10.0kb upstream 10.0kb upstream 13721 true scaffold_7: 31477485-31491205 Setaria italica
Seita.7G262100 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 31481206-31491205 Setaria italica
Seita.7G262100 10.0kb downstream 10.0kb downstream 13721 true scaffold_7: 31467485-31481205 Setaria italica
Seita.7G262100 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 31467485-31477484 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183449 5267 Panicoideae View MSA
124568745 5269 Grass View MSA
122045328 5273 Angiosperm View MSA
121344315 5274 Embryophyte View MSA
123427238 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.376     High  
cufflinks 15.962     High  
cufflinks 19.496     High  
cufflinks 19.814     High  
cufflinks 16.54     High  
cufflinks 14.072     High  
cufflinks 9.433       Low
cufflinks 10.375       Low
cufflinks 12.043        
cufflinks 27.596     High  
cufflinks 32.432     High  
cufflinks 125.123     High High
cufflinks 87.351     High High
cufflinks 12.4        
cufflinks 65.435     High High
cufflinks 9.801       Low
cufflinks 90.386     High High
cufflinks 37.356     High  
cufflinks 16.204     High  
cufflinks 67.679     High High

0 Strain