Gene : Seita.7G266900 S. italica v2.2
Defline:  (1 of 1) PTHR22937//PTHR22937:SF59 - RING FINGER CONTAINING PROTEIN Genomic Order:  2669
Name:  ? Seita.7G266900 Secondary Identifier:  ? PAC:32705212
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G266900 0.5kb upstream 0.5kb upstream 5764 true scaffold_7: 31905567-31911330 Setaria italica
Seita.7G266900 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 31910831-31911330 Setaria italica
Seita.7G266900 0.5kb downstream 0.5kb downstream 5764 true scaffold_7: 31905067-31910830 Setaria italica
Seita.7G266900 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 31905067-31905566 Setaria italica
Seita.7G266900 1.0kb upstream 1.0kb upstream 6264 true scaffold_7: 31905567-31911830 Setaria italica
Seita.7G266900 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 31910831-31911830 Setaria italica
Seita.7G266900 1.0kb downstream 1.0kb downstream 6264 true scaffold_7: 31904567-31910830 Setaria italica
Seita.7G266900 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 31904567-31905566 Setaria italica
Seita.7G266900 2.0kb upstream 2.0kb upstream 7264 true scaffold_7: 31905567-31912830 Setaria italica
Seita.7G266900 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 31910831-31912830 Setaria italica
Seita.7G266900 2.0kb downstream 2.0kb downstream 7264 true scaffold_7: 31903567-31910830 Setaria italica
Seita.7G266900 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 31903567-31905566 Setaria italica
Seita.7G266900 5.0kb upstream 5.0kb upstream 10264 true scaffold_7: 31905567-31915830 Setaria italica
Seita.7G266900 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 31910831-31915830 Setaria italica
Seita.7G266900 5.0kb downstream 5.0kb downstream 10264 true scaffold_7: 31900567-31910830 Setaria italica
Seita.7G266900 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 31900567-31905566 Setaria italica
Seita.7G266900 10.0kb upstream 10.0kb upstream 15264 true scaffold_7: 31905567-31920830 Setaria italica
Seita.7G266900 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 31910831-31920830 Setaria italica
Seita.7G266900 10.0kb downstream 10.0kb downstream 15264 true scaffold_7: 31895567-31910830 Setaria italica
Seita.7G266900 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 31895567-31905566 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180322 5267 Panicoideae View MSA
124588328 5269 Grass View MSA
122049263 5273 Angiosperm View MSA
121311321 5274 Embryophyte View MSA
123348631 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.695       Low
cufflinks 7.3        
cufflinks 6.915        
cufflinks 7.109        
cufflinks 6.874        
cufflinks 7.605        
cufflinks 7.364        
cufflinks 6.735        
cufflinks 6.252        
cufflinks 5.994       Low
cufflinks 6.763        
cufflinks 7.152        
cufflinks 7.264        
cufflinks 6.981        
cufflinks 7.521        
cufflinks 7.729       High
cufflinks 6.209       Low
cufflinks 6.333        
cufflinks 9.171       High
cufflinks 6.267        

0 Strain