Gene : Seita.7G268800 S. italica v2.2
Defline:  (1 of 1) PTHR11588:SF7 - TUBULIN GAMMA CHAIN Genomic Order:  2688
Name:  ? Seita.7G268800 Secondary Identifier:  ? PAC:32705294
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G268800 0.5kb upstream 0.5kb upstream 5904 true scaffold_7: 32059553-32065456 Setaria italica
Seita.7G268800 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 32064957-32065456 Setaria italica
Seita.7G268800 0.5kb downstream 0.5kb downstream 5904 true scaffold_7: 32059053-32064956 Setaria italica
Seita.7G268800 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 32059053-32059552 Setaria italica
Seita.7G268800 1.0kb upstream 1.0kb upstream 6404 true scaffold_7: 32059553-32065956 Setaria italica
Seita.7G268800 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 32064957-32065956 Setaria italica
Seita.7G268800 1.0kb downstream 1.0kb downstream 6404 true scaffold_7: 32058553-32064956 Setaria italica
Seita.7G268800 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 32058553-32059552 Setaria italica
Seita.7G268800 2.0kb upstream 2.0kb upstream 7404 true scaffold_7: 32059553-32066956 Setaria italica
Seita.7G268800 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 32064957-32066956 Setaria italica
Seita.7G268800 2.0kb downstream 2.0kb downstream 7404 true scaffold_7: 32057553-32064956 Setaria italica
Seita.7G268800 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 32057553-32059552 Setaria italica
Seita.7G268800 5.0kb upstream 5.0kb upstream 10404 true scaffold_7: 32059553-32069956 Setaria italica
Seita.7G268800 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 32064957-32069956 Setaria italica
Seita.7G268800 5.0kb downstream 5.0kb downstream 10404 true scaffold_7: 32054553-32064956 Setaria italica
Seita.7G268800 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 32054553-32059552 Setaria italica
Seita.7G268800 10.0kb upstream 10.0kb upstream 15404 true scaffold_7: 32059553-32074956 Setaria italica
Seita.7G268800 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 32064957-32074956 Setaria italica
Seita.7G268800 10.0kb downstream 10.0kb downstream 15404 true scaffold_7: 32049553-32064956 Setaria italica
Seita.7G268800 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 32049553-32059552 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180863 5267 Panicoideae View MSA
124568317 5269 Grass View MSA
122042290 5273 Angiosperm View MSA
121346688 5274 Embryophyte View MSA
123428620 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.479        
cufflinks 17.554     High High
cufflinks 3.183        
cufflinks 2.228       Low
cufflinks 1.859       Low
cufflinks 15.661     High High
cufflinks 7.94        
cufflinks 6.196        
cufflinks 4.768        
cufflinks 6.278        
cufflinks 9.838        
cufflinks 8.68        
cufflinks 6.702        
cufflinks 3.037       Low
cufflinks 10.678        
cufflinks 5.626        
cufflinks 9.284        
cufflinks 4.658        
cufflinks 1.688       Low
cufflinks 10.089        

0 Strain