Gene : Seita.7G268700 S. italica v2.2
Defline:  (1 of 2) PTHR24078//PTHR24078:SF257 - DNAJ HOMOLOG SUBFAMILY C MEMBER Genomic Order:  2687
Name:  ? Seita.7G268700 Secondary Identifier:  ? PAC:32705091
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G268700 0.5kb upstream 0.5kb upstream 4933 true scaffold_7: 32055051-32059983 Setaria italica
Seita.7G268700 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 32055051-32055550 Setaria italica
Seita.7G268700 0.5kb downstream 0.5kb downstream 4933 true scaffold_7: 32055551-32060483 Setaria italica
Seita.7G268700 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 32059984-32060483 Setaria italica
Seita.7G268700 1.0kb upstream 1.0kb upstream 5433 true scaffold_7: 32054551-32059983 Setaria italica
Seita.7G268700 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 32054551-32055550 Setaria italica
Seita.7G268700 1.0kb downstream 1.0kb downstream 5433 true scaffold_7: 32055551-32060983 Setaria italica
Seita.7G268700 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 32059984-32060983 Setaria italica
Seita.7G268700 2.0kb upstream 2.0kb upstream 6433 true scaffold_7: 32053551-32059983 Setaria italica
Seita.7G268700 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 32053551-32055550 Setaria italica
Seita.7G268700 2.0kb downstream 2.0kb downstream 6433 true scaffold_7: 32055551-32061983 Setaria italica
Seita.7G268700 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 32059984-32061983 Setaria italica
Seita.7G268700 5.0kb upstream 5.0kb upstream 9433 true scaffold_7: 32050551-32059983 Setaria italica
Seita.7G268700 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 32050551-32055550 Setaria italica
Seita.7G268700 5.0kb downstream 5.0kb downstream 9433 true scaffold_7: 32055551-32064983 Setaria italica
Seita.7G268700 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 32059984-32064983 Setaria italica
Seita.7G268700 10.0kb upstream 10.0kb upstream 14433 true scaffold_7: 32045551-32059983 Setaria italica
Seita.7G268700 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 32045551-32055550 Setaria italica
Seita.7G268700 10.0kb downstream 10.0kb downstream 14433 true scaffold_7: 32055551-32069983 Setaria italica
Seita.7G268700 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 32059984-32069983 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176146 5267 Panicoideae View MSA
124568792 5269 Grass View MSA
122044951 5273 Angiosperm View MSA
121345005 5274 Embryophyte View MSA
123426286 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.947        
cufflinks 13.782     High High
cufflinks 2.973       Low
cufflinks 1.955       Low
cufflinks 1.993       Low
cufflinks 9.417        
cufflinks 10.705        
cufflinks 7.142        
cufflinks 4.636        
cufflinks 8.026        
cufflinks 8.294        
cufflinks 11.651        
cufflinks 8.091        
cufflinks 10.065        
cufflinks 16.817     High High
cufflinks 4.528        
cufflinks 12.348        
cufflinks 4.095        
cufflinks 9.056        
cufflinks 14.13       High

0 Strain