Gene : Seita.7G267800 S. italica v2.2
Defline:  (1 of 1) PF08712 - Scaffold protein Nfu/NifU N terminal (Nfu_N) Genomic Order:  2678
Name:  ? Seita.7G267800 Secondary Identifier:  ? PAC:32703619
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G267800 0.5kb upstream 0.5kb upstream 3998 true scaffold_7: 31957798-31961795 Setaria italica
Seita.7G267800 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 31957798-31958297 Setaria italica
Seita.7G267800 0.5kb downstream 0.5kb downstream 3998 true scaffold_7: 31958298-31962295 Setaria italica
Seita.7G267800 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 31961796-31962295 Setaria italica
Seita.7G267800 1.0kb upstream 1.0kb upstream 4498 true scaffold_7: 31957298-31961795 Setaria italica
Seita.7G267800 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 31957298-31958297 Setaria italica
Seita.7G267800 1.0kb downstream 1.0kb downstream 4498 true scaffold_7: 31958298-31962795 Setaria italica
Seita.7G267800 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 31961796-31962795 Setaria italica
Seita.7G267800 2.0kb upstream 2.0kb upstream 5498 true scaffold_7: 31956298-31961795 Setaria italica
Seita.7G267800 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 31956298-31958297 Setaria italica
Seita.7G267800 2.0kb downstream 2.0kb downstream 5498 true scaffold_7: 31958298-31963795 Setaria italica
Seita.7G267800 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 31961796-31963795 Setaria italica
Seita.7G267800 5.0kb upstream 5.0kb upstream 8498 true scaffold_7: 31953298-31961795 Setaria italica
Seita.7G267800 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 31953298-31958297 Setaria italica
Seita.7G267800 5.0kb downstream 5.0kb downstream 8498 true scaffold_7: 31958298-31966795 Setaria italica
Seita.7G267800 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 31961796-31966795 Setaria italica
Seita.7G267800 10.0kb upstream 10.0kb upstream 13498 true scaffold_7: 31948298-31961795 Setaria italica
Seita.7G267800 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 31948298-31958297 Setaria italica
Seita.7G267800 10.0kb downstream 10.0kb downstream 13498 true scaffold_7: 31958298-31971795 Setaria italica
Seita.7G267800 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 31961796-31971795 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183840 5267 Panicoideae View MSA
124580297 5269 Grass View MSA
122043345 5273 Angiosperm View MSA
121344774 5274 Embryophyte View MSA
123425135 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.993        
cufflinks 9.24        
cufflinks 5.01       Low
cufflinks 4.569       Low
cufflinks 4.736       Low
cufflinks 9.332        
cufflinks 5.151       Low
cufflinks 8.511        
cufflinks 6.323        
cufflinks 9.06        
cufflinks 7.652        
cufflinks 10.341       High
cufflinks 9.17        
cufflinks 6.685        
cufflinks 8.583        
cufflinks 5.491        
cufflinks 11.609       High
cufflinks 5.259       Low
cufflinks 6.973        
cufflinks 10.503       High

0 Strain