Gene : Seita.7G273400 S. italica v2.2
Defline:  (1 of 1) PTHR11040:SF26 - ZINC TRANSPORTER 6, CHLOROPLASTIC Genomic Order:  2734
Name:  ? Seita.7G273400 Secondary Identifier:  ? PAC:32702850
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G273400 0.5kb upstream 0.5kb upstream 3755 true scaffold_7: 32421538-32425292 Setaria italica
Seita.7G273400 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 32424793-32425292 Setaria italica
Seita.7G273400 0.5kb downstream 0.5kb downstream 3755 true scaffold_7: 32421038-32424792 Setaria italica
Seita.7G273400 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 32421038-32421537 Setaria italica
Seita.7G273400 1.0kb upstream 1.0kb upstream 4255 true scaffold_7: 32421538-32425792 Setaria italica
Seita.7G273400 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 32424793-32425792 Setaria italica
Seita.7G273400 1.0kb downstream 1.0kb downstream 4255 true scaffold_7: 32420538-32424792 Setaria italica
Seita.7G273400 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 32420538-32421537 Setaria italica
Seita.7G273400 2.0kb upstream 2.0kb upstream 5255 true scaffold_7: 32421538-32426792 Setaria italica
Seita.7G273400 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 32424793-32426792 Setaria italica
Seita.7G273400 2.0kb downstream 2.0kb downstream 5255 true scaffold_7: 32419538-32424792 Setaria italica
Seita.7G273400 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 32419538-32421537 Setaria italica
Seita.7G273400 5.0kb upstream 5.0kb upstream 8255 true scaffold_7: 32421538-32429792 Setaria italica
Seita.7G273400 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 32424793-32429792 Setaria italica
Seita.7G273400 5.0kb downstream 5.0kb downstream 8255 true scaffold_7: 32416538-32424792 Setaria italica
Seita.7G273400 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 32416538-32421537 Setaria italica
Seita.7G273400 10.0kb upstream 10.0kb upstream 13255 true scaffold_7: 32421538-32434792 Setaria italica
Seita.7G273400 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 32424793-32434792 Setaria italica
Seita.7G273400 10.0kb downstream 10.0kb downstream 13255 true scaffold_7: 32411538-32424792 Setaria italica
Seita.7G273400 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 32411538-32421537 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176105 5267 Panicoideae View MSA
124584547 5269 Grass View MSA
122046721 5273 Angiosperm View MSA
121310647 5274 Embryophyte View MSA
123428132 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.02        
cufflinks 3.702        
cufflinks 4.274        
cufflinks 3.505        
cufflinks 3.731        
cufflinks 4.603        
cufflinks 3.65        
cufflinks 4.0        
cufflinks 2.891        
cufflinks 3.738        
cufflinks 3.497        
cufflinks 6.417        
cufflinks 7.143        
cufflinks 8.231       High
cufflinks 7.102        
cufflinks 1.546       Low
cufflinks 10.412       High
cufflinks 1.185       Low
cufflinks 6.579        
cufflinks 6.546        

0 Strain