Gene : Seita.7G277500 S. italica v2.2
Defline:  (1 of 2) PTHR11802//PTHR11802:SF20 - SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE Genomic Order:  2775
Name:  ? Seita.7G277500 Secondary Identifier:  ? PAC:32703077
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G277500 0.5kb upstream 0.5kb upstream 4323 true scaffold_7: 32692195-32696517 Setaria italica
Seita.7G277500 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 32692195-32692694 Setaria italica
Seita.7G277500 0.5kb downstream 0.5kb downstream 4323 true scaffold_7: 32692695-32697017 Setaria italica
Seita.7G277500 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 32696518-32697017 Setaria italica
Seita.7G277500 1.0kb upstream 1.0kb upstream 4823 true scaffold_7: 32691695-32696517 Setaria italica
Seita.7G277500 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 32691695-32692694 Setaria italica
Seita.7G277500 1.0kb downstream 1.0kb downstream 4823 true scaffold_7: 32692695-32697517 Setaria italica
Seita.7G277500 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 32696518-32697517 Setaria italica
Seita.7G277500 2.0kb upstream 2.0kb upstream 5823 true scaffold_7: 32690695-32696517 Setaria italica
Seita.7G277500 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 32690695-32692694 Setaria italica
Seita.7G277500 2.0kb downstream 2.0kb downstream 5823 true scaffold_7: 32692695-32698517 Setaria italica
Seita.7G277500 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 32696518-32698517 Setaria italica
Seita.7G277500 5.0kb upstream 5.0kb upstream 8823 true scaffold_7: 32687695-32696517 Setaria italica
Seita.7G277500 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 32687695-32692694 Setaria italica
Seita.7G277500 5.0kb downstream 5.0kb downstream 8823 true scaffold_7: 32692695-32701517 Setaria italica
Seita.7G277500 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 32696518-32701517 Setaria italica
Seita.7G277500 10.0kb upstream 10.0kb upstream 13823 true scaffold_7: 32682695-32696517 Setaria italica
Seita.7G277500 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 32682695-32692694 Setaria italica
Seita.7G277500 10.0kb downstream 10.0kb downstream 13823 true scaffold_7: 32692695-32706517 Setaria italica
Seita.7G277500 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 32696518-32706517 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122062966 5267 Panicoideae View MSA
124362497 5269 Grass View MSA
122043115 5273 Angiosperm View MSA
121351274 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.717        
cufflinks 0.64        
cufflinks 0.337       Low
cufflinks 0.401       Low
cufflinks 0.624        
cufflinks 0.684        
cufflinks 1.197        
cufflinks 0.704        
cufflinks 0.541        
cufflinks 2.041        
cufflinks 2.213        
cufflinks 2.704        
cufflinks 2.37        
cufflinks 0.812        
cufflinks 4.973       High
cufflinks 0.511        
cufflinks 3.726       High
cufflinks 0.442       Low
cufflinks 0.774        
cufflinks 4.503       High

0 Strain