Gene : Seita.7G284700 S. italica v2.2
Defline:  (1 of 1) PTHR10766//PTHR10766:SF48 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN Genomic Order:  2847
Name:  ? Seita.7G284700 Secondary Identifier:  ? PAC:32702150
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G284700 0.5kb upstream 0.5kb upstream 6648 true scaffold_7: 33114434-33121081 Setaria italica
Seita.7G284700 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 33114434-33114933 Setaria italica
Seita.7G284700 0.5kb downstream 0.5kb downstream 6648 true scaffold_7: 33114934-33121581 Setaria italica
Seita.7G284700 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 33121082-33121581 Setaria italica
Seita.7G284700 1.0kb upstream 1.0kb upstream 7148 true scaffold_7: 33113934-33121081 Setaria italica
Seita.7G284700 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 33113934-33114933 Setaria italica
Seita.7G284700 1.0kb downstream 1.0kb downstream 7148 true scaffold_7: 33114934-33122081 Setaria italica
Seita.7G284700 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 33121082-33122081 Setaria italica
Seita.7G284700 2.0kb upstream 2.0kb upstream 8148 true scaffold_7: 33112934-33121081 Setaria italica
Seita.7G284700 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 33112934-33114933 Setaria italica
Seita.7G284700 2.0kb downstream 2.0kb downstream 8148 true scaffold_7: 33114934-33123081 Setaria italica
Seita.7G284700 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 33121082-33123081 Setaria italica
Seita.7G284700 5.0kb upstream 5.0kb upstream 11148 true scaffold_7: 33109934-33121081 Setaria italica
Seita.7G284700 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 33109934-33114933 Setaria italica
Seita.7G284700 5.0kb downstream 5.0kb downstream 11148 true scaffold_7: 33114934-33126081 Setaria italica
Seita.7G284700 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 33121082-33126081 Setaria italica
Seita.7G284700 10.0kb upstream 10.0kb upstream 16148 true scaffold_7: 33104934-33121081 Setaria italica
Seita.7G284700 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 33104934-33114933 Setaria italica
Seita.7G284700 10.0kb downstream 10.0kb downstream 16148 true scaffold_7: 33114934-33131081 Setaria italica
Seita.7G284700 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 33121082-33131081 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194638 5267 Panicoideae View MSA
124571477 5269 Grass View MSA
122045723 5273 Angiosperm View MSA
121344967 5274 Embryophyte View MSA
123423887 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.884     High High
cufflinks 26.603     High High
cufflinks 12.959     High Low
cufflinks 11.618     High Low
cufflinks 10.736     High Low
cufflinks 25.381     High  
cufflinks 18.424     High  
cufflinks 18.629     High  
cufflinks 15.88     High  
cufflinks 16.716     High  
cufflinks 24.493     High  
cufflinks 22.926     High  
cufflinks 20.393     High  
cufflinks 15.017     High  
cufflinks 29.978     High High
cufflinks 13.341     High  
cufflinks 25.253     High  
cufflinks 12.161     High Low
cufflinks 13.499     High  
cufflinks 27.203     High High

0 Strain