Gene : Seita.7G284300 S. italica v2.2
Defline:  (1 of 2) PTHR12802:SF41 - BRAHMA ASSOCIATED PROTEIN 155 KDA Genomic Order:  2843
Name:  ? Seita.7G284300 Secondary Identifier:  ? PAC:32705999
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G284300 0.5kb upstream 0.5kb upstream 8168 true scaffold_7: 33092090-33100257 Setaria italica
Seita.7G284300 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 33099758-33100257 Setaria italica
Seita.7G284300 0.5kb downstream 0.5kb downstream 8168 true scaffold_7: 33091590-33099757 Setaria italica
Seita.7G284300 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 33091590-33092089 Setaria italica
Seita.7G284300 1.0kb upstream 1.0kb upstream 8668 true scaffold_7: 33092090-33100757 Setaria italica
Seita.7G284300 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 33099758-33100757 Setaria italica
Seita.7G284300 1.0kb downstream 1.0kb downstream 8668 true scaffold_7: 33091090-33099757 Setaria italica
Seita.7G284300 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 33091090-33092089 Setaria italica
Seita.7G284300 2.0kb upstream 2.0kb upstream 9668 true scaffold_7: 33092090-33101757 Setaria italica
Seita.7G284300 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 33099758-33101757 Setaria italica
Seita.7G284300 2.0kb downstream 2.0kb downstream 9668 true scaffold_7: 33090090-33099757 Setaria italica
Seita.7G284300 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 33090090-33092089 Setaria italica
Seita.7G284300 5.0kb upstream 5.0kb upstream 12668 true scaffold_7: 33092090-33104757 Setaria italica
Seita.7G284300 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 33099758-33104757 Setaria italica
Seita.7G284300 5.0kb downstream 5.0kb downstream 12668 true scaffold_7: 33087090-33099757 Setaria italica
Seita.7G284300 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 33087090-33092089 Setaria italica
Seita.7G284300 10.0kb upstream 10.0kb upstream 17668 true scaffold_7: 33092090-33109757 Setaria italica
Seita.7G284300 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 33099758-33109757 Setaria italica
Seita.7G284300 10.0kb downstream 10.0kb downstream 17668 true scaffold_7: 33082090-33099757 Setaria italica
Seita.7G284300 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 33082090-33092089 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183249 5267 Panicoideae View MSA
124583035 5269 Grass View MSA
122042836 5273 Angiosperm View MSA
121349137 5274 Embryophyte View MSA
123428437 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.066       High
cufflinks 2.359       High
cufflinks 0.998        
cufflinks 0.857       Low
cufflinks 0.894       Low
cufflinks 2.482       High
cufflinks 1.628        
cufflinks 1.248        
cufflinks 1.126        
cufflinks 1.393        
cufflinks 1.711        
cufflinks 1.75        
cufflinks 1.509        
cufflinks 0.785       Low
cufflinks 1.694        
cufflinks 1.716        
cufflinks 1.629        
cufflinks 1.998        
cufflinks 0.751       Low
cufflinks 1.571        

0 Strain