Gene : Seita.7G287400 S. italica v2.2
Defline:  (1 of 2) 2.4.1.214 - Glycoprotein 3-alpha-L-fucosyltransferase / GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha-1,3-fucosyltransferase Genomic Order:  2874
Name:  ? Seita.7G287400 Secondary Identifier:  ? PAC:32704574
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G287400 0.5kb upstream 0.5kb upstream 4259 true scaffold_7: 33279582-33283840 Setaria italica
Seita.7G287400 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 33279582-33280081 Setaria italica
Seita.7G287400 0.5kb downstream 0.5kb downstream 4259 true scaffold_7: 33280082-33284340 Setaria italica
Seita.7G287400 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 33283841-33284340 Setaria italica
Seita.7G287400 1.0kb upstream 1.0kb upstream 4759 true scaffold_7: 33279082-33283840 Setaria italica
Seita.7G287400 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 33279082-33280081 Setaria italica
Seita.7G287400 1.0kb downstream 1.0kb downstream 4759 true scaffold_7: 33280082-33284840 Setaria italica
Seita.7G287400 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 33283841-33284840 Setaria italica
Seita.7G287400 2.0kb upstream 2.0kb upstream 5759 true scaffold_7: 33278082-33283840 Setaria italica
Seita.7G287400 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 33278082-33280081 Setaria italica
Seita.7G287400 2.0kb downstream 2.0kb downstream 5759 true scaffold_7: 33280082-33285840 Setaria italica
Seita.7G287400 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 33283841-33285840 Setaria italica
Seita.7G287400 5.0kb upstream 5.0kb upstream 8759 true scaffold_7: 33275082-33283840 Setaria italica
Seita.7G287400 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 33275082-33280081 Setaria italica
Seita.7G287400 5.0kb downstream 5.0kb downstream 8759 true scaffold_7: 33280082-33288840 Setaria italica
Seita.7G287400 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 33283841-33288840 Setaria italica
Seita.7G287400 10.0kb upstream 10.0kb upstream 13759 true scaffold_7: 33270082-33283840 Setaria italica
Seita.7G287400 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 33270082-33280081 Setaria italica
Seita.7G287400 10.0kb downstream 10.0kb downstream 13759 true scaffold_7: 33280082-33293840 Setaria italica
Seita.7G287400 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 33283841-33293840 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176516 5267 Panicoideae View MSA
124585160 5269 Grass View MSA
122042578 5273 Angiosperm View MSA
121347574 5274 Embryophyte View MSA
123427537 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.217        
cufflinks 4.816        
cufflinks 2.526       Low
cufflinks 2.405       Low
cufflinks 2.748       Low
cufflinks 4.677        
cufflinks 3.64        
cufflinks 3.789        
cufflinks 2.944        
cufflinks 3.154        
cufflinks 4.597        
cufflinks 5.486       High
cufflinks 5.885       High
cufflinks 3.285        
cufflinks 4.47        
cufflinks 4.221        
cufflinks 4.612        
cufflinks 4.895        
cufflinks 2.355       Low
cufflinks 4.274        

0 Strain