Gene : Seita.7G294500 S. italica v2.2
Defline:  (1 of 4) KOG4595 - Uncharacterized conserved protein Genomic Order:  2945
Name:  ? Seita.7G294500 Secondary Identifier:  ? PAC:32704555
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G294500 0.5kb upstream 0.5kb upstream 3267 true scaffold_7: 33671610-33674876 Setaria italica
Seita.7G294500 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 33674377-33674876 Setaria italica
Seita.7G294500 0.5kb downstream 0.5kb downstream 3267 true scaffold_7: 33671110-33674376 Setaria italica
Seita.7G294500 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 33671110-33671609 Setaria italica
Seita.7G294500 1.0kb upstream 1.0kb upstream 3767 true scaffold_7: 33671610-33675376 Setaria italica
Seita.7G294500 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 33674377-33675376 Setaria italica
Seita.7G294500 1.0kb downstream 1.0kb downstream 3767 true scaffold_7: 33670610-33674376 Setaria italica
Seita.7G294500 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 33670610-33671609 Setaria italica
Seita.7G294500 2.0kb upstream 2.0kb upstream 4767 true scaffold_7: 33671610-33676376 Setaria italica
Seita.7G294500 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 33674377-33676376 Setaria italica
Seita.7G294500 2.0kb downstream 2.0kb downstream 4767 true scaffold_7: 33669610-33674376 Setaria italica
Seita.7G294500 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 33669610-33671609 Setaria italica
Seita.7G294500 5.0kb upstream 5.0kb upstream 7767 true scaffold_7: 33671610-33679376 Setaria italica
Seita.7G294500 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 33674377-33679376 Setaria italica
Seita.7G294500 5.0kb downstream 5.0kb downstream 7767 true scaffold_7: 33666610-33674376 Setaria italica
Seita.7G294500 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 33666610-33671609 Setaria italica
Seita.7G294500 10.0kb upstream 10.0kb upstream 12767 true scaffold_7: 33671610-33684376 Setaria italica
Seita.7G294500 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 33674377-33684376 Setaria italica
Seita.7G294500 10.0kb downstream 10.0kb downstream 12767 true scaffold_7: 33661610-33674376 Setaria italica
Seita.7G294500 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 33661610-33671609 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187624 5267 Panicoideae View MSA
124590217 5269 Grass View MSA
122044441 5273 Angiosperm View MSA
121344709 5274 Embryophyte View MSA
123425132 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.856        
cufflinks 1.863        
cufflinks 0.866       Low
cufflinks 0.537       Low
cufflinks 1.028        
cufflinks 1.612        
cufflinks 1.361        
cufflinks 1.751        
cufflinks 2.16       High
cufflinks 1.835        
cufflinks 1.784        
cufflinks 1.559        
cufflinks 1.0        
cufflinks 1.378        
cufflinks 1.819        
cufflinks 1.82        
cufflinks 1.82        
cufflinks 1.685        
cufflinks 0.846       Low
cufflinks 1.393        

0 Strain