Gene : Seita.7G296800 S. italica v2.2
Defline:  (1 of 1) PTHR12081//PTHR12081:SF48 - TRANSCRIPTION FACTOR E2F Genomic Order:  2968
Name:  ? Seita.7G296800 Secondary Identifier:  ? PAC:32703944
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G296800 0.5kb upstream 0.5kb upstream 5025 true scaffold_7: 33824498-33829522 Setaria italica
Seita.7G296800 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 33824498-33824997 Setaria italica
Seita.7G296800 0.5kb downstream 0.5kb downstream 5025 true scaffold_7: 33824998-33830022 Setaria italica
Seita.7G296800 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 33829523-33830022 Setaria italica
Seita.7G296800 1.0kb upstream 1.0kb upstream 5525 true scaffold_7: 33823998-33829522 Setaria italica
Seita.7G296800 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 33823998-33824997 Setaria italica
Seita.7G296800 1.0kb downstream 1.0kb downstream 5525 true scaffold_7: 33824998-33830522 Setaria italica
Seita.7G296800 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 33829523-33830522 Setaria italica
Seita.7G296800 2.0kb upstream 2.0kb upstream 6525 true scaffold_7: 33822998-33829522 Setaria italica
Seita.7G296800 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 33822998-33824997 Setaria italica
Seita.7G296800 2.0kb downstream 2.0kb downstream 6525 true scaffold_7: 33824998-33831522 Setaria italica
Seita.7G296800 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 33829523-33831522 Setaria italica
Seita.7G296800 5.0kb upstream 5.0kb upstream 9525 true scaffold_7: 33819998-33829522 Setaria italica
Seita.7G296800 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 33819998-33824997 Setaria italica
Seita.7G296800 5.0kb downstream 5.0kb downstream 9525 true scaffold_7: 33824998-33834522 Setaria italica
Seita.7G296800 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 33829523-33834522 Setaria italica
Seita.7G296800 10.0kb upstream 10.0kb upstream 14525 true scaffold_7: 33814998-33829522 Setaria italica
Seita.7G296800 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 33814998-33824997 Setaria italica
Seita.7G296800 10.0kb downstream 10.0kb downstream 14525 true scaffold_7: 33824998-33839522 Setaria italica
Seita.7G296800 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 33829523-33839522 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187179 5267 Panicoideae View MSA
124571570 5269 Grass View MSA
122042305 5273 Angiosperm View MSA
121345510 5274 Embryophyte View MSA
123428750 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.435        
cufflinks 5.267       High
cufflinks 2.825        
cufflinks 2.623        
cufflinks 2.106       Low
cufflinks 5.591       High
cufflinks 3.817        
cufflinks 2.412        
cufflinks 2.283        
cufflinks 3.847        
cufflinks 4.653        
cufflinks 2.418        
cufflinks 3.06        
cufflinks 2.875        
cufflinks 2.815        
cufflinks 4.608        
cufflinks 2.889        
cufflinks 7.4       High
cufflinks 2.193       Low
cufflinks 2.08       Low

0 Strain