Gene : Seita.8G060200 S. italica v2.2
Defline:  (1 of 3) PTHR23115:SF164 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 Genomic Order:  602
Name:  ? Seita.8G060200 Secondary Identifier:  ? PAC:32715056
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G060200 0.5kb upstream 0.5kb upstream 5654 true scaffold_8: 5592548-5598201 Setaria italica
Seita.8G060200 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 5597702-5598201 Setaria italica
Seita.8G060200 0.5kb downstream 0.5kb downstream 5654 true scaffold_8: 5592048-5597701 Setaria italica
Seita.8G060200 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 5592048-5592547 Setaria italica
Seita.8G060200 1.0kb upstream 1.0kb upstream 6154 true scaffold_8: 5592548-5598701 Setaria italica
Seita.8G060200 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 5597702-5598701 Setaria italica
Seita.8G060200 1.0kb downstream 1.0kb downstream 6154 true scaffold_8: 5591548-5597701 Setaria italica
Seita.8G060200 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 5591548-5592547 Setaria italica
Seita.8G060200 2.0kb upstream 2.0kb upstream 7154 true scaffold_8: 5592548-5599701 Setaria italica
Seita.8G060200 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 5597702-5599701 Setaria italica
Seita.8G060200 2.0kb downstream 2.0kb downstream 7154 true scaffold_8: 5590548-5597701 Setaria italica
Seita.8G060200 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 5590548-5592547 Setaria italica
Seita.8G060200 5.0kb upstream 5.0kb upstream 10154 true scaffold_8: 5592548-5602701 Setaria italica
Seita.8G060200 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 5597702-5602701 Setaria italica
Seita.8G060200 5.0kb downstream 5.0kb downstream 10154 true scaffold_8: 5587548-5597701 Setaria italica
Seita.8G060200 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 5587548-5592547 Setaria italica
Seita.8G060200 10.0kb upstream 10.0kb upstream 15154 true scaffold_8: 5592548-5607701 Setaria italica
Seita.8G060200 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 5597702-5607701 Setaria italica
Seita.8G060200 10.0kb downstream 10.0kb downstream 15154 true scaffold_8: 5582548-5597701 Setaria italica
Seita.8G060200 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 5582548-5592547 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193144 5267 Panicoideae View MSA
124580433 5269 Grass View MSA
122045938 5273 Angiosperm View MSA
121345904 5274 Embryophyte View MSA
123426083 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.194        
cufflinks 8.511       High
cufflinks 5.464        
cufflinks 4.795        
cufflinks 4.219       Low
cufflinks 8.48       High
cufflinks 6.023        
cufflinks 6.645        
cufflinks 5.019        
cufflinks 5.623        
cufflinks 7.385        
cufflinks 6.01        
cufflinks 5.453        
cufflinks 5.139        
cufflinks 7.858       High
cufflinks 5.063        
cufflinks 7.461        
cufflinks 4.29       Low
cufflinks 4.185       Low
cufflinks 7.972       High

0 Strain