Gene : Seita.8G067700 S. italica v2.2
Defline:  (1 of 1) PTHR13856:SF95 - F24J8.3 PROTEIN Genomic Order:  677
Name:  ? Seita.8G067700 Secondary Identifier:  ? PAC:32715214
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G067700 0.5kb upstream 0.5kb upstream 6208 true scaffold_8: 6760700-6766907 Setaria italica
Seita.8G067700 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 6766408-6766907 Setaria italica
Seita.8G067700 0.5kb downstream 0.5kb downstream 6208 true scaffold_8: 6760200-6766407 Setaria italica
Seita.8G067700 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 6760200-6760699 Setaria italica
Seita.8G067700 1.0kb upstream 1.0kb upstream 6708 true scaffold_8: 6760700-6767407 Setaria italica
Seita.8G067700 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 6766408-6767407 Setaria italica
Seita.8G067700 1.0kb downstream 1.0kb downstream 6708 true scaffold_8: 6759700-6766407 Setaria italica
Seita.8G067700 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 6759700-6760699 Setaria italica
Seita.8G067700 2.0kb upstream 2.0kb upstream 7708 true scaffold_8: 6760700-6768407 Setaria italica
Seita.8G067700 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 6766408-6768407 Setaria italica
Seita.8G067700 2.0kb downstream 2.0kb downstream 7708 true scaffold_8: 6758700-6766407 Setaria italica
Seita.8G067700 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 6758700-6760699 Setaria italica
Seita.8G067700 5.0kb upstream 5.0kb upstream 10708 true scaffold_8: 6760700-6771407 Setaria italica
Seita.8G067700 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 6766408-6771407 Setaria italica
Seita.8G067700 5.0kb downstream 5.0kb downstream 10708 true scaffold_8: 6755700-6766407 Setaria italica
Seita.8G067700 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 6755700-6760699 Setaria italica
Seita.8G067700 10.0kb upstream 10.0kb upstream 15708 true scaffold_8: 6760700-6776407 Setaria italica
Seita.8G067700 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 6766408-6776407 Setaria italica
Seita.8G067700 10.0kb downstream 10.0kb downstream 15708 true scaffold_8: 6750700-6766407 Setaria italica
Seita.8G067700 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 6750700-6760699 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184910 5267 Panicoideae View MSA
124576518 5269 Grass View MSA
122045200 5273 Angiosperm View MSA
121349203 5274 Embryophyte View MSA
123427882 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.118        
cufflinks 9.318        
cufflinks 5.72       Low
cufflinks 5.35       Low
cufflinks 5.495       Low
cufflinks 8.969        
cufflinks 6.908        
cufflinks 5.173       Low
cufflinks 5.525       Low
cufflinks 10.189        
cufflinks 11.028        
cufflinks 12.046       High
cufflinks 11.247        
cufflinks 9.062        
cufflinks 14.747     High High
cufflinks 5.803       Low
cufflinks 11.57        
cufflinks 12.089     High High
cufflinks 5.862       Low
cufflinks 10.969        

0 Strain