Gene : Seita.8G007800 S. italica v2.2
Defline:  (1 of 2) PTHR23308//PTHR23308:SF29 - NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 Genomic Order:  78
Name:  ? Seita.8G007800 Secondary Identifier:  ? PAC:32717653
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G007800 0.5kb upstream 0.5kb upstream 2447 true scaffold_8: 444548-446994 Setaria italica
Seita.8G007800 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 446495-446994 Setaria italica
Seita.8G007800 0.5kb downstream 0.5kb downstream 2447 true scaffold_8: 444048-446494 Setaria italica
Seita.8G007800 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 444048-444547 Setaria italica
Seita.8G007800 1.0kb upstream 1.0kb upstream 2947 true scaffold_8: 444548-447494 Setaria italica
Seita.8G007800 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 446495-447494 Setaria italica
Seita.8G007800 1.0kb downstream 1.0kb downstream 2947 true scaffold_8: 443548-446494 Setaria italica
Seita.8G007800 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 443548-444547 Setaria italica
Seita.8G007800 2.0kb upstream 2.0kb upstream 3947 true scaffold_8: 444548-448494 Setaria italica
Seita.8G007800 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 446495-448494 Setaria italica
Seita.8G007800 2.0kb downstream 2.0kb downstream 3947 true scaffold_8: 442548-446494 Setaria italica
Seita.8G007800 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 442548-444547 Setaria italica
Seita.8G007800 5.0kb upstream 5.0kb upstream 6947 true scaffold_8: 444548-451494 Setaria italica
Seita.8G007800 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 446495-451494 Setaria italica
Seita.8G007800 5.0kb downstream 5.0kb downstream 6947 true scaffold_8: 439548-446494 Setaria italica
Seita.8G007800 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 439548-444547 Setaria italica
Seita.8G007800 10.0kb upstream 10.0kb upstream 11947 true scaffold_8: 444548-456494 Setaria italica
Seita.8G007800 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 446495-456494 Setaria italica
Seita.8G007800 10.0kb downstream 10.0kb downstream 11947 true scaffold_8: 434548-446494 Setaria italica
Seita.8G007800 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 434548-444547 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198411 5267 Panicoideae View MSA
124583819 5269 Grass View MSA
122042553 5273 Angiosperm View MSA
121344574 5274 Embryophyte View MSA
123426095 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.444        
cufflinks 11.539        
cufflinks 8.514        
cufflinks 9.58        
cufflinks 15.604     High  
cufflinks 8.7        
cufflinks 17.295     High  
cufflinks 24.221     High High
cufflinks 17.034     High  
cufflinks 2.133        
cufflinks 1.979        
cufflinks 0.384       Low
cufflinks 0.943        
cufflinks 11.682        
cufflinks 0.22       Low
cufflinks 17.647     High  
cufflinks 0.349       Low
cufflinks 4.224        
cufflinks 29.055     High High
cufflinks 0.168       Low

0 Strain