Gene : Seita.8G009800 S. italica v2.2
Defline:  (1 of 42) PF04525 - LURP-one-related (LOR) Genomic Order:  98
Name:  ? Seita.8G009800 Secondary Identifier:  ? PAC:32717223
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G009800 0.5kb upstream 0.5kb upstream 2451 true scaffold_8: 601505-603955 Setaria italica
Seita.8G009800 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 601505-602004 Setaria italica
Seita.8G009800 0.5kb downstream 0.5kb downstream 2451 true scaffold_8: 602005-604455 Setaria italica
Seita.8G009800 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 603956-604455 Setaria italica
Seita.8G009800 1.0kb upstream 1.0kb upstream 2951 true scaffold_8: 601005-603955 Setaria italica
Seita.8G009800 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 601005-602004 Setaria italica
Seita.8G009800 1.0kb downstream 1.0kb downstream 2951 true scaffold_8: 602005-604955 Setaria italica
Seita.8G009800 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 603956-604955 Setaria italica
Seita.8G009800 2.0kb upstream 2.0kb upstream 3951 true scaffold_8: 600005-603955 Setaria italica
Seita.8G009800 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 600005-602004 Setaria italica
Seita.8G009800 2.0kb downstream 2.0kb downstream 3951 true scaffold_8: 602005-605955 Setaria italica
Seita.8G009800 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 603956-605955 Setaria italica
Seita.8G009800 5.0kb upstream 5.0kb upstream 6951 true scaffold_8: 597005-603955 Setaria italica
Seita.8G009800 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 597005-602004 Setaria italica
Seita.8G009800 5.0kb downstream 5.0kb downstream 6951 true scaffold_8: 602005-608955 Setaria italica
Seita.8G009800 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 603956-608955 Setaria italica
Seita.8G009800 10.0kb upstream 10.0kb upstream 11951 true scaffold_8: 592005-603955 Setaria italica
Seita.8G009800 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 592005-602004 Setaria italica
Seita.8G009800 10.0kb downstream 10.0kb downstream 11951 true scaffold_8: 602005-613955 Setaria italica
Seita.8G009800 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 603956-613955 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194387 5267 Panicoideae View MSA
124581066 5269 Grass View MSA
122048664 5273 Angiosperm View MSA
121311063 5274 Embryophyte View MSA
123348415 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.131     Low  
cufflinks 0.178        
cufflinks 0.705       High
cufflinks 0.377        
cufflinks 0.296        
cufflinks 0.231        
cufflinks 0.383        
cufflinks 0.362        
cufflinks 0.168        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.145        
cufflinks 0.034     Low Low
cufflinks 1.187       High
cufflinks 0.141        
cufflinks 0.172        
cufflinks 0.027     Low Low
cufflinks 0.027     Low Low
cufflinks 0.787       High
cufflinks 0.172        

0 Strain