Gene : Seita.8G009600 S. italica v2.2
Defline:  (1 of 42) PF04525 - LURP-one-related (LOR) Genomic Order:  96
Name:  ? Seita.8G009600 Secondary Identifier:  ? PAC:32716331
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G009600 0.5kb upstream 0.5kb upstream 2536 true scaffold_8: 584755-587290 Setaria italica
Seita.8G009600 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 584755-585254 Setaria italica
Seita.8G009600 0.5kb downstream 0.5kb downstream 2536 true scaffold_8: 585255-587790 Setaria italica
Seita.8G009600 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 587291-587790 Setaria italica
Seita.8G009600 1.0kb upstream 1.0kb upstream 3036 true scaffold_8: 584255-587290 Setaria italica
Seita.8G009600 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 584255-585254 Setaria italica
Seita.8G009600 1.0kb downstream 1.0kb downstream 3036 true scaffold_8: 585255-588290 Setaria italica
Seita.8G009600 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 587291-588290 Setaria italica
Seita.8G009600 2.0kb upstream 2.0kb upstream 4036 true scaffold_8: 583255-587290 Setaria italica
Seita.8G009600 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 583255-585254 Setaria italica
Seita.8G009600 2.0kb downstream 2.0kb downstream 4036 true scaffold_8: 585255-589290 Setaria italica
Seita.8G009600 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 587291-589290 Setaria italica
Seita.8G009600 5.0kb upstream 5.0kb upstream 7036 true scaffold_8: 580255-587290 Setaria italica
Seita.8G009600 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 580255-585254 Setaria italica
Seita.8G009600 5.0kb downstream 5.0kb downstream 7036 true scaffold_8: 585255-592290 Setaria italica
Seita.8G009600 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 587291-592290 Setaria italica
Seita.8G009600 10.0kb upstream 10.0kb upstream 12036 true scaffold_8: 575255-587290 Setaria italica
Seita.8G009600 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 575255-585254 Setaria italica
Seita.8G009600 10.0kb downstream 10.0kb downstream 12036 true scaffold_8: 585255-597290 Setaria italica
Seita.8G009600 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 587291-597290 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179117 5267 Panicoideae View MSA
124583669 5269 Grass View MSA
122048664 5273 Angiosperm View MSA
121311063 5274 Embryophyte View MSA
123348415 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.145        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.037     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low Low
cufflinks 0.008     Low Low
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.666        
cufflinks 0.093     Low  
cufflinks 0.573        
cufflinks 0.525        
cufflinks 0.015     Low Low
cufflinks 2.642       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.282       High
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.186       High

0 Strain