Gene : Seita.8G014000 S. italica v2.2
Defline:  (1 of 1) KOG0192//KOG0198 - Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs // MEKK and related serine/threonine protein kinases Genomic Order:  140
Name:  ? Seita.8G014000 Secondary Identifier:  ? PAC:32715149
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G014000 0.5kb upstream 0.5kb upstream 5432 true scaffold_8: 816529-821960 Setaria italica
Seita.8G014000 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 816529-817028 Setaria italica
Seita.8G014000 0.5kb downstream 0.5kb downstream 5432 true scaffold_8: 817029-822460 Setaria italica
Seita.8G014000 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 821961-822460 Setaria italica
Seita.8G014000 1.0kb upstream 1.0kb upstream 5932 true scaffold_8: 816029-821960 Setaria italica
Seita.8G014000 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 816029-817028 Setaria italica
Seita.8G014000 1.0kb downstream 1.0kb downstream 5932 true scaffold_8: 817029-822960 Setaria italica
Seita.8G014000 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 821961-822960 Setaria italica
Seita.8G014000 2.0kb upstream 2.0kb upstream 6932 true scaffold_8: 815029-821960 Setaria italica
Seita.8G014000 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 815029-817028 Setaria italica
Seita.8G014000 2.0kb downstream 2.0kb downstream 6932 true scaffold_8: 817029-823960 Setaria italica
Seita.8G014000 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 821961-823960 Setaria italica
Seita.8G014000 5.0kb upstream 5.0kb upstream 9932 true scaffold_8: 812029-821960 Setaria italica
Seita.8G014000 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 812029-817028 Setaria italica
Seita.8G014000 5.0kb downstream 5.0kb downstream 9932 true scaffold_8: 817029-826960 Setaria italica
Seita.8G014000 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 821961-826960 Setaria italica
Seita.8G014000 10.0kb upstream 10.0kb upstream 14932 true scaffold_8: 807029-821960 Setaria italica
Seita.8G014000 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 807029-817028 Setaria italica
Seita.8G014000 10.0kb downstream 10.0kb downstream 14932 true scaffold_8: 817029-831960 Setaria italica
Seita.8G014000 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 821961-831960 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188754 5267 Panicoideae View MSA
124587286 5269 Grass View MSA
122041830 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121309892 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.292       Low
cufflinks 2.423       Low
cufflinks 3.725        
cufflinks 4.118        
cufflinks 5.277        
cufflinks 3.966        
cufflinks 6.828        
cufflinks 3.323        
cufflinks 2.966        
cufflinks 4.025        
cufflinks 1.884       Low
cufflinks 7.064        
cufflinks 8.182        
cufflinks 6.435        
cufflinks 10.839       High
cufflinks 5.589        
cufflinks 18.415     High High
cufflinks 6.779        
cufflinks 16.959     High High
cufflinks 10.956       High

0 Strain