Gene : Seita.8G017500 S. italica v2.2
Defline:  (1 of 2) PTHR13832:SF199 - PROTEIN PHOSPHATASE 2C 65-RELATED Genomic Order:  175
Name:  ? Seita.8G017500 Secondary Identifier:  ? PAC:32716486
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G017500 0.5kb upstream 0.5kb upstream 3427 true scaffold_8: 993092-996518 Setaria italica
Seita.8G017500 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 996019-996518 Setaria italica
Seita.8G017500 0.5kb downstream 0.5kb downstream 3427 true scaffold_8: 992592-996018 Setaria italica
Seita.8G017500 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 992592-993091 Setaria italica
Seita.8G017500 1.0kb upstream 1.0kb upstream 3927 true scaffold_8: 993092-997018 Setaria italica
Seita.8G017500 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 996019-997018 Setaria italica
Seita.8G017500 1.0kb downstream 1.0kb downstream 3927 true scaffold_8: 992092-996018 Setaria italica
Seita.8G017500 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 992092-993091 Setaria italica
Seita.8G017500 2.0kb upstream 2.0kb upstream 4927 true scaffold_8: 993092-998018 Setaria italica
Seita.8G017500 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 996019-998018 Setaria italica
Seita.8G017500 2.0kb downstream 2.0kb downstream 4927 true scaffold_8: 991092-996018 Setaria italica
Seita.8G017500 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 991092-993091 Setaria italica
Seita.8G017500 5.0kb upstream 5.0kb upstream 7927 true scaffold_8: 993092-1001018 Setaria italica
Seita.8G017500 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 996019-1001018 Setaria italica
Seita.8G017500 5.0kb downstream 5.0kb downstream 7927 true scaffold_8: 988092-996018 Setaria italica
Seita.8G017500 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 988092-993091 Setaria italica
Seita.8G017500 10.0kb upstream 10.0kb upstream 12927 true scaffold_8: 993092-1006018 Setaria italica
Seita.8G017500 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 996019-1006018 Setaria italica
Seita.8G017500 10.0kb downstream 10.0kb downstream 12927 true scaffold_8: 983092-996018 Setaria italica
Seita.8G017500 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 983092-993091 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196181 5267 Panicoideae View MSA
124590709 5269 Grass View MSA
122048670 5273 Angiosperm View MSA
121311066 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.278        
cufflinks 7.006       High
cufflinks 0.095       Low
cufflinks 0.087     Low Low
cufflinks 0.356        
cufflinks 6.239       High
cufflinks 2.995       High
cufflinks 1.712        
cufflinks 1.915        
cufflinks 1.393        
cufflinks 3.229       High
cufflinks 0.22        
cufflinks 0.217        
cufflinks 0.089     Low Low
cufflinks 0.243        
cufflinks 0.499        
cufflinks 0.236        
cufflinks 0.187        
cufflinks 0.075     Low Low
cufflinks 0.234        

0 Strain