Gene : Seita.8G016000 S. italica v2.2
Defline:  (1 of 153) PF00651 - BTB/POZ domain (BTB) Genomic Order:  160
Name:  ? Seita.8G016000 Secondary Identifier:  ? PAC:32716391
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G016000 0.5kb upstream 0.5kb upstream 3710 true scaffold_8: 929693-933402 Setaria italica
Seita.8G016000 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 929693-930192 Setaria italica
Seita.8G016000 0.5kb downstream 0.5kb downstream 3710 true scaffold_8: 930193-933902 Setaria italica
Seita.8G016000 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 933403-933902 Setaria italica
Seita.8G016000 1.0kb upstream 1.0kb upstream 4210 true scaffold_8: 929193-933402 Setaria italica
Seita.8G016000 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 929193-930192 Setaria italica
Seita.8G016000 1.0kb downstream 1.0kb downstream 4210 true scaffold_8: 930193-934402 Setaria italica
Seita.8G016000 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 933403-934402 Setaria italica
Seita.8G016000 2.0kb upstream 2.0kb upstream 5210 true scaffold_8: 928193-933402 Setaria italica
Seita.8G016000 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 928193-930192 Setaria italica
Seita.8G016000 2.0kb downstream 2.0kb downstream 5210 true scaffold_8: 930193-935402 Setaria italica
Seita.8G016000 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 933403-935402 Setaria italica
Seita.8G016000 5.0kb upstream 5.0kb upstream 8210 true scaffold_8: 925193-933402 Setaria italica
Seita.8G016000 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 925193-930192 Setaria italica
Seita.8G016000 5.0kb downstream 5.0kb downstream 8210 true scaffold_8: 930193-938402 Setaria italica
Seita.8G016000 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 933403-938402 Setaria italica
Seita.8G016000 10.0kb upstream 10.0kb upstream 13210 true scaffold_8: 920193-933402 Setaria italica
Seita.8G016000 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 920193-930192 Setaria italica
Seita.8G016000 10.0kb downstream 10.0kb downstream 13210 true scaffold_8: 930193-943402 Setaria italica
Seita.8G016000 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 933403-943402 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198304 5267 Panicoideae View MSA
124576240 5269 Grass View MSA
122047536 5273 Angiosperm View MSA
123429159 5275 Viridiplantae View MSA
121351417 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.427        
cufflinks 0.732        
cufflinks 0.635        
cufflinks 0.692        
cufflinks 0.573        
cufflinks 1.054        
cufflinks 1.49        
cufflinks 0.726        
cufflinks 0.552        
cufflinks 1.568        
cufflinks 1.748        
cufflinks 1.094        
cufflinks 4.431       High
cufflinks 0.222       Low
cufflinks 3.004       High
cufflinks 0.756        
cufflinks 2.072        
cufflinks 0.058     Low Low
cufflinks 0.823        
cufflinks 2.723       High

0 Strain