Gene : Seita.8G025900 S. italica v2.2
Defline:  (1 of 3) 1.5.1.43 - Carboxynorspermidine synthase / Carboxyspermidine dehydrogenase Genomic Order:  259
Name:  ? Seita.8G025900 Secondary Identifier:  ? PAC:32717767
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G025900 0.5kb upstream 0.5kb upstream 5015 true scaffold_8: 1585361-1590375 Setaria italica
Seita.8G025900 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 1585361-1585860 Setaria italica
Seita.8G025900 0.5kb downstream 0.5kb downstream 5015 true scaffold_8: 1585861-1590875 Setaria italica
Seita.8G025900 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 1590376-1590875 Setaria italica
Seita.8G025900 1.0kb upstream 1.0kb upstream 5515 true scaffold_8: 1584861-1590375 Setaria italica
Seita.8G025900 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 1584861-1585860 Setaria italica
Seita.8G025900 1.0kb downstream 1.0kb downstream 5515 true scaffold_8: 1585861-1591375 Setaria italica
Seita.8G025900 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 1590376-1591375 Setaria italica
Seita.8G025900 2.0kb upstream 2.0kb upstream 6515 true scaffold_8: 1583861-1590375 Setaria italica
Seita.8G025900 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 1583861-1585860 Setaria italica
Seita.8G025900 2.0kb downstream 2.0kb downstream 6515 true scaffold_8: 1585861-1592375 Setaria italica
Seita.8G025900 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 1590376-1592375 Setaria italica
Seita.8G025900 5.0kb upstream 5.0kb upstream 9515 true scaffold_8: 1580861-1590375 Setaria italica
Seita.8G025900 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 1580861-1585860 Setaria italica
Seita.8G025900 5.0kb downstream 5.0kb downstream 9515 true scaffold_8: 1585861-1595375 Setaria italica
Seita.8G025900 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 1590376-1595375 Setaria italica
Seita.8G025900 10.0kb upstream 10.0kb upstream 14515 true scaffold_8: 1575861-1590375 Setaria italica
Seita.8G025900 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 1575861-1585860 Setaria italica
Seita.8G025900 10.0kb downstream 10.0kb downstream 14515 true scaffold_8: 1585861-1600375 Setaria italica
Seita.8G025900 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 1590376-1600375 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196317 5267 Panicoideae View MSA
124569214 5269 Grass View MSA
122051589 5273 Angiosperm View MSA
121345153 5274 Embryophyte View MSA
123426869 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.109        
cufflinks 1.634        
cufflinks 0.906        
cufflinks 0.656        
cufflinks 2.094        
cufflinks 1.84        
cufflinks 3.651       High
cufflinks 8.285       High
cufflinks 9.972       High
cufflinks 0.293     Low  
cufflinks 0.572        
cufflinks 0.113     Low Low
cufflinks 0.111     Low Low
cufflinks 0.999        
cufflinks 0.045     Low Low
cufflinks 2.132        
cufflinks 0.059     Low Low
cufflinks 0.498        
cufflinks 0.489        
cufflinks 0.038     Low Low

0 Strain