Gene : Seita.8G028600 S. italica v2.2
Defline:  (1 of 2) PTHR11772:SF18 - ALUMINUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS Genomic Order:  286
Name:  ? Seita.8G028600 Secondary Identifier:  ? PAC:32715094
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G028600 0.5kb upstream 0.5kb upstream 4666 true scaffold_8: 1776231-1780896 Setaria italica
Seita.8G028600 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 1780397-1780896 Setaria italica
Seita.8G028600 0.5kb downstream 0.5kb downstream 4666 true scaffold_8: 1775731-1780396 Setaria italica
Seita.8G028600 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 1775731-1776230 Setaria italica
Seita.8G028600 1.0kb upstream 1.0kb upstream 5166 true scaffold_8: 1776231-1781396 Setaria italica
Seita.8G028600 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 1780397-1781396 Setaria italica
Seita.8G028600 1.0kb downstream 1.0kb downstream 5166 true scaffold_8: 1775231-1780396 Setaria italica
Seita.8G028600 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 1775231-1776230 Setaria italica
Seita.8G028600 2.0kb upstream 2.0kb upstream 6166 true scaffold_8: 1776231-1782396 Setaria italica
Seita.8G028600 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 1780397-1782396 Setaria italica
Seita.8G028600 2.0kb downstream 2.0kb downstream 6166 true scaffold_8: 1774231-1780396 Setaria italica
Seita.8G028600 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 1774231-1776230 Setaria italica
Seita.8G028600 5.0kb upstream 5.0kb upstream 9166 true scaffold_8: 1776231-1785396 Setaria italica
Seita.8G028600 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 1780397-1785396 Setaria italica
Seita.8G028600 5.0kb downstream 5.0kb downstream 9166 true scaffold_8: 1771231-1780396 Setaria italica
Seita.8G028600 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 1771231-1776230 Setaria italica
Seita.8G028600 10.0kb upstream 10.0kb upstream 14166 true scaffold_8: 1776231-1790396 Setaria italica
Seita.8G028600 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 1780397-1790396 Setaria italica
Seita.8G028600 10.0kb downstream 10.0kb downstream 14166 true scaffold_8: 1766231-1780396 Setaria italica
Seita.8G028600 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 1766231-1776230 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192196 5267 Panicoideae View MSA
124580846 5269 Grass View MSA
122049991 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.854     High  
cufflinks 26.884     High  
cufflinks 13.996     High  
cufflinks 7.535       Low
cufflinks 8.203       Low
cufflinks 30.825     High  
cufflinks 42.49     High  
cufflinks 36.614     High  
cufflinks 12.934     High  
cufflinks 38.7     High  
cufflinks 27.275     High  
cufflinks 23.85     High  
cufflinks 19.548     High  
cufflinks 38.943     High  
cufflinks 26.391     High  
cufflinks 56.672     High High
cufflinks 14.173     High  
cufflinks 11.019       Low
cufflinks 205.629     High High
cufflinks 13.664        

0 Strain