Gene : Seita.8G036300 S. italica v2.2
Defline:  (1 of 2) PTHR22952:SF208 - BZIP TRANSCRIPTION FACTOR-LIKE PROTEIN Genomic Order:  363
Name:  ? Seita.8G036300 Secondary Identifier:  ? PAC:32716675
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G036300 0.5kb upstream 0.5kb upstream 2966 true scaffold_8: 2350931-2353896 Setaria italica
Seita.8G036300 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 2353397-2353896 Setaria italica
Seita.8G036300 0.5kb downstream 0.5kb downstream 2966 true scaffold_8: 2350431-2353396 Setaria italica
Seita.8G036300 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 2350431-2350930 Setaria italica
Seita.8G036300 1.0kb upstream 1.0kb upstream 3466 true scaffold_8: 2350931-2354396 Setaria italica
Seita.8G036300 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 2353397-2354396 Setaria italica
Seita.8G036300 1.0kb downstream 1.0kb downstream 3466 true scaffold_8: 2349931-2353396 Setaria italica
Seita.8G036300 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 2349931-2350930 Setaria italica
Seita.8G036300 2.0kb upstream 2.0kb upstream 4466 true scaffold_8: 2350931-2355396 Setaria italica
Seita.8G036300 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 2353397-2355396 Setaria italica
Seita.8G036300 2.0kb downstream 2.0kb downstream 4466 true scaffold_8: 2348931-2353396 Setaria italica
Seita.8G036300 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 2348931-2350930 Setaria italica
Seita.8G036300 5.0kb upstream 5.0kb upstream 7466 true scaffold_8: 2350931-2358396 Setaria italica
Seita.8G036300 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 2353397-2358396 Setaria italica
Seita.8G036300 5.0kb downstream 5.0kb downstream 7466 true scaffold_8: 2345931-2353396 Setaria italica
Seita.8G036300 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 2345931-2350930 Setaria italica
Seita.8G036300 10.0kb upstream 10.0kb upstream 12466 true scaffold_8: 2350931-2363396 Setaria italica
Seita.8G036300 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2353397-2363396 Setaria italica
Seita.8G036300 10.0kb downstream 10.0kb downstream 12466 true scaffold_8: 2340931-2353396 Setaria italica
Seita.8G036300 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 2340931-2350930 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176922 5267 Panicoideae View MSA
124580085 5269 Grass View MSA
122047006 5273 Angiosperm View MSA
121351169 5274 Embryophyte View MSA
123425858 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.033     Low  
cufflinks 0.052     Low  
cufflinks 0.064     Low  
cufflinks 0.256       High
cufflinks 0.08     Low  
cufflinks 0.132     Low  
cufflinks 0.021     Low  
cufflinks 0.073     Low  
cufflinks 0.015     Low Low
cufflinks 0.268     Low High
cufflinks 0.085     Low  
cufflinks 0.045     Low  
cufflinks 0.174        
cufflinks 0.215       High
cufflinks 0.014     Low Low
cufflinks 0.024     Low  
cufflinks 0.013     Low Low
cufflinks 0.395       High
cufflinks 0.224       High
cufflinks 0.014     Low Low

0 Strain