Gene : Seita.8G036100 S. italica v2.2
Defline:  (1 of 135) PF02365 - No apical meristem (NAM) protein (NAM) Genomic Order:  361
Name:  ? Seita.8G036100 Secondary Identifier:  ? PAC:32715735
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G036100 0.5kb upstream 0.5kb upstream 2038 true scaffold_8: 2338251-2340288 Setaria italica
Seita.8G036100 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 2338251-2338750 Setaria italica
Seita.8G036100 0.5kb downstream 0.5kb downstream 2038 true scaffold_8: 2338751-2340788 Setaria italica
Seita.8G036100 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 2340289-2340788 Setaria italica
Seita.8G036100 1.0kb upstream 1.0kb upstream 2538 true scaffold_8: 2337751-2340288 Setaria italica
Seita.8G036100 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 2337751-2338750 Setaria italica
Seita.8G036100 1.0kb downstream 1.0kb downstream 2538 true scaffold_8: 2338751-2341288 Setaria italica
Seita.8G036100 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 2340289-2341288 Setaria italica
Seita.8G036100 2.0kb upstream 2.0kb upstream 3538 true scaffold_8: 2336751-2340288 Setaria italica
Seita.8G036100 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 2336751-2338750 Setaria italica
Seita.8G036100 2.0kb downstream 2.0kb downstream 3538 true scaffold_8: 2338751-2342288 Setaria italica
Seita.8G036100 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 2340289-2342288 Setaria italica
Seita.8G036100 5.0kb upstream 5.0kb upstream 6538 true scaffold_8: 2333751-2340288 Setaria italica
Seita.8G036100 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 2333751-2338750 Setaria italica
Seita.8G036100 5.0kb downstream 5.0kb downstream 6538 true scaffold_8: 2338751-2345288 Setaria italica
Seita.8G036100 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 2340289-2345288 Setaria italica
Seita.8G036100 10.0kb upstream 10.0kb upstream 11538 true scaffold_8: 2328751-2340288 Setaria italica
Seita.8G036100 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2328751-2338750 Setaria italica
Seita.8G036100 10.0kb downstream 10.0kb downstream 11538 true scaffold_8: 2338751-2350288 Setaria italica
Seita.8G036100 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 2340289-2350288 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198115 5267 Panicoideae View MSA
124580232 5269 Grass View MSA
122050248 5273 Angiosperm View MSA
121311822 5274 Embryophyte View MSA
123349064 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.929       High
cufflinks 0.128        
cufflinks 0.13        
cufflinks 0.122        
cufflinks 0.059     Low Low
cufflinks 0.129     Low  
cufflinks 1.602       High
cufflinks 0.084     Low  
cufflinks 0.027     Low Low
cufflinks 1.383       High
cufflinks 0.16        
cufflinks 0.275        
cufflinks 0.281        
cufflinks 0.323        
cufflinks 0.444        
cufflinks 0.118        
cufflinks 0.318        
cufflinks 0.112        
cufflinks 0.865       High
cufflinks 0.168        

0 Strain